Clostridioides difficile R20291: CDR20291_0490
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Entry
CDR20291_0490 CDS
T00998
Symbol
nth
Name
(GenBank) endonuclease iii
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
cdl
Clostridioides difficile R20291
Pathway
cdl03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cdl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CDR20291_0490 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cdl03400
]
CDR20291_0490 (nth)
Enzymes [BR:
cdl01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
CDR20291_0490 (nth)
DNA repair and recombination proteins [BR:
cdl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CDR20291_0490 (nth)
Prokaryotic type
CDR20291_0490 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
Ogg-HhH
HHH_5
RecR_HhH
HPD
Ago_PAZ_arc
HHH_8
IMS_HHH
Motif
Other DBs
NCBI-ProteinID:
CBE02318
UniProt:
A0A9R0BIA5
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All DBs
Position
591467..592072
Genome browser
AA seq
201 aa
AA seq
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MEKLYPDAKCELNYGTAFELLIATILSAQCTDVRVNKVTSELFKKYNTARDFANLSIEEI
SKEIKSCGLYKSKSQKIKDTSEQLCELYDGEVPDSLEKLIKLPGVGRKTAGVVLSNAFNH
PAIAVDTHVFRVSNRIGIVDEPNPQKTEFALMEAIPKERWSHSHHVLIFHGRRMCKARNP
ECASCPIKEDCNYYKELNETK
NT seq
606 nt
NT seq
+upstream
nt +downstream
nt
ttggaaaaattgtacccagatgctaaatgtgagttaaattatgggacagcctttgaactt
ttaatagcaactattttatcagcacaatgtactgatgtaagagtgaataaagttacttca
gagttgtttaaaaagtacaacacagctagagactttgctaatttgagcattgaagaaatt
agtaaagagataaagagttgtggtctttacaaaagcaagtctcaaaaaataaaggataca
tctgaacagctatgtgaattatatgatggtgaagtacctgatagcttagaaaagcttata
aaattacctggtgttggaagaaaaacggcaggggttgtacttagtaacgcttttaatcat
ccagcaatagctgtagatactcatgtatttagagttagcaatagaataggaatagtggac
gagccaaatcctcaaaaaacagaatttgcacttatggaagctataccaaaagaaagatgg
tcacactcacatcatgtattaatttttcatggaagaagaatgtgtaaagctagaaatcca
gaatgtgcaagttgcccaataaaagaagattgtaattattataaagaacttaatgaaacg
aaataa
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