Clostridioides difficile R20291: CDR20291_1523
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Entry
CDR20291_1523 CDS
T00998
Symbol
vanS
Name
(GenBank) two-component sensor histidine kinase
KO
K18350
two-component system, OmpR family, sensor histidine kinase VanS [EC:
2.7.13.3
]
Organism
cdl
Clostridioides difficile R20291
Pathway
cdl01502
Vancomycin resistance
cdl02020
Two-component system
Module
cdl_M00652
Vancomycin resistance, D-Ala-D-Ser type
Brite
KEGG Orthology (KO) [BR:
cdl00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CDR20291_1523 (vanS)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
CDR20291_1523 (vanS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
cdl01001
]
CDR20291_1523 (vanS)
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
cdl02022
]
CDR20291_1523 (vanS)
01504 Antimicrobial resistance genes [BR:
cdl01504
]
CDR20291_1523 (vanS)
Enzymes [BR:
cdl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
CDR20291_1523 (vanS)
Protein kinases [BR:
cdl01001
]
Histidine kinases
OmpR family
CDR20291_1523 (vanS)
Two-component system [BR:
cdl02022
]
OmpR family
VanS-VanR (VanE type vancomycin resistance)
CDR20291_1523 (vanS)
Antimicrobial resistance genes [BR:
cdl01504
]
Gene sets
Vancomycin resistance modules
Vancomycin resistance, D-Ala-D-Ser type [MD:
M00652
]
CDR20291_1523 (vanS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HATPase_c
HisKA
HATPase_c_5
Motif
Other DBs
NCBI-ProteinID:
CBE04145
UniProt:
A0A9R0BKA9
LinkDB
All DBs
Position
1795142..1796224
Genome browser
AA seq
360 aa
AA seq
DB search
MRTALMAFIAIIFIWILYSFILYGKFSIWIVSFFENAFRMEYKAALNLYQQIFRNSMELF
MILAMVIVFFIIFRVYLNWFTKYFSEINQGIDSLIKEDVGEVALSPELLAIEKKINSIKH
ILEQRKFETQMAEQRKNELIVYLAHDLKTPLTSVIGYLTLLRDESQISEELRKKYLSISL
DKAERLEDLINEFFEITRFNLSNISLEYSTVSLTRMLEQLTYEFKPTLMSKNLKYTLNVT
PNMMIRCDVNKMQRVFDNLLRNAVYYSFEDTTIEITAVQEDDYIKLKFINHSNTIPEEKL
ERIFEQFYRLDTSRNSNSGRAGLGLAIAKEIVELHNGTITAHSENNIITFKVIIPIVGNL
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgagaacagctttaatggcatttatagccattattttcatatggattttatattctttt
atattgtatggtaagttttctatctggatagtatcattctttgaaaatgcttttcgtatg
gaatataaagctgcattgaatttatatcagcagattttccgtaatagcatggagctcttc
atgatactagctatggtgattgtgttttttataatattccgtgtttatttaaattggttt
acaaaatattttagtgaaataaatcaaggtattgactctcttatcaaagaagatgttgga
gaagtggctttatctccagagttattggcaatagaaaagaaaataaactcaattaaacat
atacttgaacaacgtaaatttgagacacaaatggcagaacaacgtaagaatgaacttatt
gtttatcttgcacatgatttaaaaacaccacttacatcagttatagggtatctgacacta
cttcgagatgaaagtcagatttctgaagaactgcgaaaaaaatatttatctatttcgttg
gataaggcagagcgtcttgaagatttaattaatgaattctttgaaattacaaggtttaat
ttatcaaatatatcacttgaatacagtacagtaagcttaactcgtatgcttgaacaacta
acatatgagtttaaacctactttgatgagtaagaatttaaaatatacactgaatgttaca
ccaaatatgatgataaggtgtgatgttaataaaatgcaacgtgtatttgataacttatta
cgaaatgctgtttattatagttttgaagatactactattgaaataacagctgtacaggag
gatgattatataaagcttaaatttataaatcatagcaatacgattccagaggaaaaactt
gagcgtatttttgaacaattttacaggttggatacatctcgtaattcaaacagtggtaga
gctgggttgggacttgctatagctaaagaaatagtggagcttcataacgggacaataaca
gctcatagcgagaacaatataattacctttaaggttattattccgattgtaggaaatttg
taa
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