Clostridioides difficile R20291: CDR20291_1525
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Entry
CDR20291_1525 CDS
T00998
Name
(GenBank) putative D-alanyl-D-alanine carboxypeptidase
KO
K18866
zinc D-Ala-D-Ala dipeptidase/carboxypeptidase [EC:
3.4.13.22
3.4.17.14
]
Organism
cdl
Clostridioides difficile R20291
Pathway
cdl00550
Peptidoglycan biosynthesis
cdl01100
Metabolic pathways
cdl01502
Vancomycin resistance
cdl02020
Two-component system
Module
cdl_M00652
Vancomycin resistance, D-Ala-D-Ser type
Brite
KEGG Orthology (KO) [BR:
cdl00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
CDR20291_1525
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CDR20291_1525
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
CDR20291_1525
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cdl01002
]
CDR20291_1525
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
cdl01011
]
CDR20291_1525
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
cdl01504
]
CDR20291_1525
Enzymes [BR:
cdl01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.13 Dipeptidases
3.4.13.22 D-Ala-D-Ala dipeptidase
CDR20291_1525
3.4.17 Metallocarboxypeptidases
3.4.17.14 zinc D-Ala-D-Ala carboxypeptidase
CDR20291_1525
Peptidases and inhibitors [BR:
cdl01002
]
Metallo peptidases
Family M15: zinc D-Ala-D-Ala carboxypeptidase family
CDR20291_1525
Peptidoglycan biosynthesis and degradation proteins [BR:
cdl01011
]
Peptidoglycan biosynthesis and degradation
Carboxypeptidase
CDR20291_1525
Antimicrobial resistance genes [BR:
cdl01504
]
Gene sets
Vancomycin resistance modules
Vancomycin resistance, D-Ala-D-Ser type [MD:
M00652
]
CDR20291_1525
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VanY
Motif
Other DBs
NCBI-ProteinID:
CBE04148
UniProt:
A0A9R0BK81
LinkDB
All DBs
Position
1797585..1798388
Genome browser
AA seq
267 aa
AA seq
DB search
MNNILLDKNKEDKMTNTILLTKDKVYDGNLILVNAFLPVKTSEDIDLIPVDTRFPSILMK
REATNILQNILKSICGINEIVPVSGYRTAEEQQDIYSSSLRDNGKDFTKKFVALPNHSEH
QTGLAIDLGLKKEVIDFICPEFPYNGICNEFRKAALHYGFIERYQCKKEEITGISQEPWH
FRYVGYPHSEIINKMNLALEEYIEYIKRFSYTNCLKIEDKEKIIEIFYVPIHTKEEVRIS
IPEQCVYQISGNNKDGFIVTFWRNRKD
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
atgaataatattttattagataaaaataaagaagataaaatgacaaatactatcttattg
actaaagataaagtttatgatgggaatctaattctagtaaatgcttttttaccagttaaa
acatctgaagatatagatttaattcctgtagatacaaggtttccaagtattcttatgaaa
cgtgaagctacaaatattttacaaaatattttaaaaagtatatgtggaataaatgaaata
gtacctgtaagtggatatcgtactgcagaggaacaacaagatatatattcaagctctctg
cgtgacaatggaaaagactttactaaaaagtttgtagcacttccaaatcacagtgaacat
cagacagggcttgctattgatttagggttgaagaaagaggttatagattttatctgccct
gaatttccttataatggtatttgtaatgagttccgtaaggcagcactacattatggtttt
atagagcgttatcagtgtaaaaaagaagaaataacaggaatatctcaagaaccatggcat
tttcgttatgtcggatatccacattctgagattatcaataaaatgaatctcgcccttgaa
gaatatatagaatatattaagagattttcgtatacaaattgtttaaaaatagaagataaa
gaaaaaattatagaaatcttttatgtgcctattcatactaaagaagaagtgagaatctct
atacctgaacaatgtgtatatcaaatatcgggtaacaataaggatggttttattgtgaca
ttttggagaaatagaaaggactaa
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