Clostridioides difficile R20291: CDR20291_2062
Help
Entry
CDR20291_2062 CDS
T00998
Name
(GenBank) radical SAM-superfamily protein
KO
K03150
2-iminoacetate synthase [EC:
4.1.99.19
]
Organism
cdl
Clostridioides difficile R20291
Pathway
cdl00730
Thiamine metabolism
cdl01100
Metabolic pathways
cdl01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
cdl00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
CDR20291_2062
Enzymes [BR:
cdl01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.19 2-iminoacetate synthase
CDR20291_2062
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BATS
Radical_SAM
Fer4_12
Motif
Other DBs
NCBI-ProteinID:
CBE05093
UniProt:
A0A9R0CEY6
LinkDB
All DBs
Position
2415386..2416762
Genome browser
AA seq
458 aa
AA seq
DB search
MFINHELINSLLEDAKNSTSDDIEKVLDKADRREKLSYKDIATLLEVEDKKQLDRLFSIA
GQIKNEIYGNRVVLFAPLYVSNYCVNECVYCGFSKCNKFKRKKLTMEEIKEEVKILEKMG
HKRLALEAGEDPKNCDINYILDCLDAIYSTYNENGNIRRVNVNIAATSVDEYKLLKEKGI
GTYILFQETYHKPTFIKMHGQSIKNDYYYHLTAFDRAMEAGVDDVGAGVLFGLSDPKFEV
LGLMMHNEHLEEKFGVGFHTISFPRLKKAEGMSLEDFPHLVSDDMFKKIVAITRLAVPFT
GIIMSTRETAEMRNELLKYGVSQISAGSLTGVGGYKAYEDGDNTEQFEVGDHRSPVEVLK
ELITDGYIPSYCTACYRKGRTGDRFMSLAKSRQIHNVCTPNALTTLNEFLIDYGDEELKI
MGKKLIAEEIGKIEREDIRNIVSNNMTALERGERDLYL
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgttcataaaccatgaacttattaattctttattagaagatgcaaaaaattcaacttct
gatgatattgaaaaggtacttgataaggctgatagaagggaaaaacttagttataaagat
atagctacacttcttgaagtagaagataaaaaacaactagatagattatttagtatagct
gggcaaataaaaaatgaaatatatggtaatagagtggttttatttgcccctctttatgta
tcaaactactgtgtaaatgaatgtgtttattgcggttttagtaaatgcaacaaatttaaa
agaaaaaaacttaccatggaagagataaaggaagaggttaaaatattagaaaaaatgggt
cataaaagacttgctctagaagctggtgaagaccctaaaaattgtgatataaattacatc
ttagattgcttagatgcaatttattcaacatataatgaaaacggaaatataagaagggta
aacgttaacatagcagctacaagtgtagatgagtataaattactaaaagaaaaaggaata
ggaacttatatattattccaagaaacttatcacaaaccaacatttataaaaatgcatggt
caatctataaaaaatgactattattaccatttaacagcttttgatagagctatggaagct
ggtgttgatgatgttggtgcaggagttttatttggtttatctgaccctaaatttgaagtt
ctaggacttatgatgcacaacgaacacttagaggaaaaatttggtgtaggtttccatact
atatctttccctagattgaaaaaagctgaaggtatgagcttagaagattttcctcactta
gtttctgacgatatgttcaaaaaaatagtagctataactagattggctgttccttttact
ggaatcataatgtccactagagaaactgctgaaatgagaaatgagttactaaaatatggt
gtatcacaaattagtgcaggttctctaacaggtgttggaggatataaagcatatgaagat
ggtgacaatacagaacaattcgaagttggagaccatagaagccctgttgaggtgcttaaa
gaactgattactgatggatatatacctagttattgtacagcttgttatcgtaaaggtaga
actggcgatagattcatgagcttagctaaaagtcgacaaatccataatgtatgtacgcca
aatgctcttactacattaaatgaatttttaatcgattatggagatgaagaacttaaaatt
atgggtaaaaaacttatcgcagaagaaataggtaagatagaaagagaagatataagaaac
atagtatctaacaatatgactgccttagagcgtggagaaagagatttatacctataa
DBGET
integrated database retrieval system
