Clostridioides difficile R20291: CDR20291_3125
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Entry
CDR20291_3125 CDS
T00998
Name
(GenBank) putative uncharacterized protein
KO
K18349
two-component system, OmpR family, response regulator VanR
Organism
cdl
Clostridioides difficile R20291
Pathway
cdl01502
Vancomycin resistance
cdl02020
Two-component system
Module
cdl_M00652
Vancomycin resistance, D-Ala-D-Ser type
Brite
KEGG Orthology (KO) [BR:
cdl00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CDR20291_3125
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
CDR20291_3125
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
cdl02022
]
CDR20291_3125
01504 Antimicrobial resistance genes [BR:
cdl01504
]
CDR20291_3125
Two-component system [BR:
cdl02022
]
OmpR family
VanS-VanR (VanE type vancomycin resistance)
CDR20291_3125
Antimicrobial resistance genes [BR:
cdl01504
]
Gene sets
Vancomycin resistance modules
Vancomycin resistance, D-Ala-D-Ser type [MD:
M00652
]
CDR20291_3125
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
Trans_reg_C
GerE
Maf_N
Staph_reg_Sar_Rot
Motif
Other DBs
NCBI-ProteinID:
CBE06963
UniProt:
A0A9R0BN58
LinkDB
All DBs
Position
complement(3731394..3732092)
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AA seq
232 aa
AA seq
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MSGKILVVDDERDIADLIEVYLTNENYIVYKFYSGLDALNCINLNEFDLAILDVMLPGVN
GFSLCQKIREKYTYPIIMLTAKDEETDKITGLTLGADDYVTKPFRPLELVARVKAQIRRY
KKYSGSLQSGEELSHIFSFLGLELNTQTYECHLNGKALSLTPTEFSILHVLLKNKGSVVN
SENLFHAIWKDEYYNKSNNTITVHIRHLREKLGDTVDEAKYIKTIWGVGYKI
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
atgagtggaaaaattttagttgtagatgacgaacgtgatatagctgatttaatagaagtc
taccttacaaatgaaaactatattgtttataaattttattctggtcttgatgcactaaac
tgcattaatttaaatgaatttgaccttgcaattttagatgttatgttgccaggagtaaat
ggattttctttatgccaaaaaatccgagaaaaatatacttatccaatcattatgttaaca
gctaaggatgaagaaacagacaagattacaggcttaactttaggtgcagatgattatgtt
actaaacctttccgacctttggaacttgttgctagagtgaaggcacagattagaagatat
aagaaatacagtggaagtttacaatctggtgaagaactttcacatattttttctttttta
ggtctggaattgaatacccaaacatatgaatgccatttaaatggtaaagctctttcactt
actccaacagagttttctattctacatgtattattgaaaaataaaggctctgtggtaaat
tcagaaaatctttttcatgctatctggaaagatgaatattacaataaaagtaacaatact
ataacagttcatattcgccatcttcgtgaaaaattaggtgatactgtagatgaagcaaaa
tatataaaaacaatttggggtgttggttacaagatttga
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