Castellaniella defragrans: BN940_09696
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Entry
BN940_09696 CDS
T03058
Name
(GenBank) 3-isopropylmalate dehydratase small subunit
KO
K01704
3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:
4.2.1.33
4.2.1.35
]
Organism
cdn
Castellaniella defragrans
Pathway
cdn00290
Valine, leucine and isoleucine biosynthesis
cdn00660
C5-Branched dibasic acid metabolism
cdn01100
Metabolic pathways
cdn01110
Biosynthesis of secondary metabolites
cdn01210
2-Oxocarboxylic acid metabolism
cdn01230
Biosynthesis of amino acids
Module
cdn_M00432
Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate
Brite
KEGG Orthology (KO) [BR:
cdn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00660 C5-Branched dibasic acid metabolism
BN940_09696
09105 Amino acid metabolism
00290 Valine, leucine and isoleucine biosynthesis
BN940_09696
Enzymes [BR:
cdn01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.33 3-isopropylmalate dehydratase
BN940_09696
4.2.1.35 (R)-2-methylmalate dehydratase
BN940_09696
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aconitase_C
Motif
Other DBs
NCBI-ProteinID:
CDM24399
UniProt:
W8WXU1
LinkDB
All DBs
Position
2087093..2087749
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AA seq
218 aa
AA seq
DB search
MQAFTTHRGLVAPLDRENVDTDLIIPKQFLKSIKRTGFGPNLFDELRYLDHGEPGMDNSG
RPLNPDFVLNRPRYQGASILLCRKNFGCGSSREHAPWALQQYGFRALIAPSYADIFFNNS
FKNGLLPIVLPEAVVARLFQAVEAAPGYELTVDLAEQRVSAPDGESWSFEIDAYRKESLL
KGLDEIGQTLLHADEIRAFEAQRMARHPWLVRQNPASL
NT seq
657 nt
NT seq
+upstream
nt +downstream
nt
atgcaagccttcaccacgcaccggggcctggtggcccccctggaccgggaaaacgtcgat
accgacctgatcattcccaagcagttcctgaaatccatcaagcgcacgggcttcggcccc
aacctgttcgacgagctgcgctacctggaccacggcgagccgggcatggacaacagcggc
cgaccgctgaatccggatttcgtgctgaaccggccgcgctaccagggcgcctcgatcctg
ctgtgccgcaagaacttcggctgcggctccagccgcgagcacgcgccctgggcgctgcag
cagtacggctttcgcgcgctcatcgcgccgtcctacgccgacatcttcttcaacaacagc
ttcaagaacggcctgctgcccatcgtgctgcccgaggccgtggtggcgcgcctgttccag
gcggtcgaagccgcgccgggctacgagctgaccgtggacctggccgagcagcgggtgtcc
gcgcccgacggcgaatcctggtccttcgagatcgacgcctaccgcaaggaatcgctgctg
aagggtctggacgagatcggccagaccctgctgcacgccgacgagatccgcgccttcgag
gcgcagcgcatggcgcggcacccctggctggtgcgccagaaccccgccagcctttga
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