Castellaniella defragrans: BN940_13101
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Entry
BN940_13101 CDS
T03058
Name
(GenBank) 2-oxoglutarate dehydrogenase E1 component
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
cdn
Castellaniella defragrans
Pathway
cdn00020
Citrate cycle (TCA cycle)
cdn00785
Lipoic acid metabolism
cdn01100
Metabolic pathways
cdn01110
Biosynthesis of secondary metabolites
cdn01120
Microbial metabolism in diverse environments
cdn01200
Carbon metabolism
cdn01210
2-Oxocarboxylic acid metabolism
Module
cdn_M00009
Citrate cycle (TCA cycle, Krebs cycle)
cdn_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
cdn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
BN940_13101
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
BN940_13101
Enzymes [BR:
cdn01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
BN940_13101
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Paralog
GFIT
Motif
Pfam:
OxoGdeHyase_C
Transket_pyr
E1_dh
2-oxogl_dehyd_N
DUF7869
Motif
Other DBs
NCBI-ProteinID:
CDM25070
UniProt:
W8X9M2
LinkDB
All DBs
Position
complement(2834145..2837024)
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AA seq
959 aa
AA seq
DB search
MSTEQELQSNSYLFGANAPYVEDLYEAYLDNPGSVPDQWRSYFDQLQHQPAVDGREATRD
QAHAPIVASFAQRARENAFQIRPAQASDQSLAIASKQVYVQSIIAAYRSLGSRIAQLDPL
KRRDRPEIPELDPAFYGLSEADLDQIYSATNTYFTKADTMTMRDILKALRDTYCRNVGAE
FMHISDPAVKRWIQERLESTLGVPELSVDEKRNILRQVTEAEGLERFLHTKYVGQKRFSL
EGGESFIASMDEVVNHAGENGVQEIVVGMAHRGRLNMLVNIMGKMPGDLFAEFEGKHAQS
LSDGDVKYHNGFSSDLSTRGGPVHLSLAFNPSHLEIVNPVVEGSVRARQDRRGDAAGDQV
LPVLVHGDAAFAGQGVVMETLNLAQTRGYGTGGTLHIVINNQIGFTTSDPRDTRSTLYCT
DVVKMIEAPVFHVNGDDPEAVVFVTRLALDYRQQFKHDVVVDIVCFRKLGHNEQDTPSLT
QPLMYKSIGTHPGTRKLYADRLVAQGVLAEDEPDQMVKDYRQLMEDGQRTVEPVLTDYKN
KYSTDWSPFLGAKWTDHADTGVPLAELTRIGERLTQVPDGFTVHPLVKKLLADRLAMARG
EHPVDWGMGEHLAFATLVANGYAIRITGQDSGRGTFTHRHAVLHDQKRERWDDGTYVPLQ
NVSENQAPFTVIDSVLSEAAVLGFEYGYATAEPNVLTIWEAQFGDFANGAQVVIDQFITS
GEAKWGRQCGLVLMLPHGYEGQGPEHSSARIERFLQLCADNNIQAVQPTTGAQIFHVLRR
QMIRPFRKPLVLFTPKSLLRNKNATSPLEDLATGTFQPVIGETDAEIVPADVKRVQVCSG
KVYYDLVHARAEQGRKDVAILRIEQLYPFAHKSFQAELQKYPNAKELVWVQDEPQNQGPW
FYVQHHLYENMSDGQKLGYAGRPASASPAVGYLAKHQEQQRALIEQAFSPKLKSFSLIK
NT seq
2880 nt
NT seq
+upstream
nt +downstream
nt
atgtccacggaacaagaactccagtccaattcctatttgttcggcgccaatgcgccctac
gtagaagacctctacgaagcctatctagacaacccgggttccgttccggaccagtggcgt
tcctacttcgatcagctgcagcaccagcccgccgtcgatggccgcgaagccacccgcgac
caggcccacgccccgatcgtcgcctccttcgcccagcgcgcccgcgagaacgccttccag
atccgccccgcgcaggcctccgaccagtccctggccatcgccagcaagcaggtctacgtc
cagtcgatcatcgccgcctaccgctcgctgggctcgcgcatcgcccagctcgaccccctg
aagcgccgcgaccgtccggaaatcccggaactggatcccgccttctacggcctgtccgag
gccgacctcgaccagatctattcggccacgaacacgtatttcaccaaggccgacacgatg
accatgcgggacatcctcaaggccctgcgtgacacgtactgccgcaacgtcggcgccgaa
ttcatgcacatctccgatccggcggtcaagcgctggatccaggagcgcctggaatccacg
ctgggcgtgcccgagctctccgtcgacgaaaagcgcaacatcctgcgccaggtgaccgag
gccgaaggcctggaacgcttcctgcacaccaagtacgtcggccagaagcgcttctccctg
gaaggcggcgagagcttcatcgcctcgatggacgaggtcgtgaaccacgccggcgagaac
ggcgtccaggaaatcgtcgtgggcatggcccaccgcggccgcctgaacatgctggtcaac
atcatgggcaagatgcccggcgacctgttcgccgaattcgagggcaagcacgcccagtcc
ctgagcgacggcgacgtcaagtaccacaacggcttctccagcgacctgtccacgcgcggc
ggcccggtccacctgtcgctggccttcaacccctcgcacctggaaatcgtcaacccggtg
gtcgaaggcagcgtgcgcgcccgccaggatcgccgcggcgacgcggccggcgaccaggtc
ctgccggtgctggtgcacggcgacgcggccttcgccggccagggcgtggtgatggaaacc
ctgaacctggcccagacgcgcggctacggcacgggtggcacgctgcacatcgtcatcaac
aaccagatcggcttcacgacctcggacccgcgcgacacgcgctccacgctgtactgcacg
gacgtggtcaagatgatcgaggcccccgtcttccacgtcaacggcgacgatcccgaggcc
gtggtcttcgtcacccgcctggccctggactaccgccagcagttcaagcacgacgtggtc
gtggacatcgtctgcttccgcaagctgggccacaacgagcaggacacgccgtccctgacc
cagccgctgatgtacaagagcatcggcacgcaccccggcacgcgcaagctctacgccgac
cgcctggtggcgcagggcgtgctggccgaggacgagcccgaccagatggtcaaggactac
cgccagctcatggaagacggccagcgcacggtcgagccggtgctgaccgactacaagaac
aagtattccaccgactggtcgccgttcctgggcgccaaatggacggaccacgccgacacc
ggcgtgcccctggccgaactgacccgcatcggcgaacggctcacccaggtgccggacggc
ttcaccgtgcatccgctggtcaagaagctgctggccgaccgcctggccatggcgcgcggc
gagcatcccgtggactggggcatgggcgagcacctggccttcgccaccctggtggccaac
ggctacgccatccgcatcaccggccaggattccggccgcggcaccttcacccaccgccac
gccgtgctgcacgaccagaagcgcgagcgctgggacgacggcacctacgtgccgctgcag
aacgtctccgagaaccaggcgccgttcacggtgatcgactccgtgctgtccgaagccgcg
gtgctgggctttgaatacggctacgccaccgccgagcccaacgtgctgaccatctgggaa
gcccagttcggcgacttcgccaacggcgcccaggtcgtgatcgaccagttcatcacctcc
ggcgaggccaagtggggccgccagtgcggcctggtgctgatgctgccgcacggctacgaa
ggccagggtcccgagcactcctcggcgcgcatcgagcgcttcctgcagctgtgcgcggac
aacaacatccaggccgtgcagccgaccaccggcgcgcagatcttccacgtgctgcgccgc
cagatgatccggcccttccgcaagccgctggtcctcttcacgcccaagtcgctgctgcgc
aacaagaacgccacctcgcccctggaggacctggccaccggcaccttccagcccgtgatc
ggcgagaccgacgcggagatcgtgccggccgacgtgaagcgcgtgcaggtgtgctccggc
aaggtctactacgacctggtccacgcgcgggccgaacagggccgcaaggacgtggccatc
ctgcgcatcgagcagctctatcccttcgcccacaagtccttccaggccgaactgcagaaa
tatcccaacgccaaggagctggtctgggtccaggacgagccgcagaaccaggggccgtgg
ttctacgtgcagcaccacctgtacgagaacatgagcgacggccagaagctcggctacgca
ggccgcccggcctcggcctcgcccgccgtgggctacctggccaagcaccaggagcagcag
cgcgccctgatcgagcaggccttttcgcccaagctcaagagcttctcgctgatcaagtaa
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