Candida dubliniensis: CD36_07940
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Entry
CD36_07940 CDS
T01140
Name
(RefSeq) hypothetical protein
KO
K12608
CCR4-NOT complex subunit CAF16
Organism
cdu
Candida dubliniensis
Pathway
cdu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cdu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CD36_07940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cdu03019
]
CD36_07940
Messenger RNA biogenesis [BR:
cdu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
CD36_07940
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
SMC_N
AAA_23
AAA_29
AAA
AAA_15
NACHT
RsgA_GTPase
AAA_13
AAA_27
AAA_18
AAA_22
AAA_33
AAA_16
AAA_28
Motif
Other DBs
NCBI-GeneID:
8044985
NCBI-ProteinID:
XP_002417440
UniProt:
B9W8M0
LinkDB
All DBs
Position
1:1894796..1895758
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AA seq
320 aa
AA seq
DB search
MTLDSIDNTLAIEVKNLTYEFPNSKKIGLQDFNLAIPWGTTNLVVGPNGAGKSTLLRILA
GKTLIKKGHLKLGGFDPFHFSSQRHEQSNSDINNYITYLGTEWATNSIIKRDIPVNLLLA
SIGGETYQERRNLLIDILDIDPSWSMLNISDGERRRVQIAMGLVKPWKLLLLDEVTIDLD
VVVRSKLLNYLKQECQERSCTVVYATHIFDGLGHKWCDRVIHIDAGLKLNDVQIKDIEFV
NDSSRVEVGDEKIIVGKAESLHPLALFWLNKDLERRGTREDEKSKMSKRHNDYINSRDGK
YFDADDSKLAQYFKSTRSSK
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgacattagatagtatcgataacactttagcaattgaggttaaaaaccttacttacgag
ttcccaaacagcaaaaagattggattacaagatttcaatctagccatcccctggggcact
acaaacttggtagttggaccgaatggtgcagggaaatcaacactattgcgtatattagca
ggaaaaacattgatcaaaaaaggtcatctcaaacttggtggattcgacccattccatttt
tcgtctcaacgtcacgagcaatccaactctgacatcaataattatataacgtatttgggc
accgaatgggcaactaattctatcatcaaaagagacatacctgtcaacttattacttgca
tccattggtggagaaacgtatcaagagagacgtaatttgttgattgacatattggatatt
gatccaagttggtcgatgttgaatataagtgatggagaaagacgtcgtgtacagattgcc
atggggttggtgaagccttggaaattattactattggatgaagtcactattgatttagat
gttgtggtcagactgaagttgttaaactatttaaagcaagagtgtcaggagagaagctgt
actgttgtatatgccacacatatatttgatgggttgggacataaatggtgtgatagagtg
atacacatagatgctggccttaagttgaatgatgtgcaaataaaggatatagagtttgtg
aatgatagtagcagagttgaagttggtgatgaaaagattattgttggtaaagccgagtcc
ttacatccgttggcgttattctggttgaacaaggatctagaaagaagaggaactagagag
gacgagaaatcaaaaatgagtaagcgacacaatgactacatcaattccagagacggtaaa
tattttgatgctgacgattcaaaacttgcacaatatttcaaaagtacaagaagcagcaaa
tag
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