Clostridium diolis: F3K33_12655
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Entry
F3K33_12655 CDS
T06237
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
cdy
Clostridium diolis
Pathway
cdy01501
beta-Lactam resistance
cdy01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
cdy00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
F3K33_12655
01503 Cationic antimicrobial peptide (CAMP) resistance
F3K33_12655
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cdy03036
]
F3K33_12655
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cdy02000
]
F3K33_12655
01504 Antimicrobial resistance genes [BR:
cdy01504
]
F3K33_12655
Chromosome and associated proteins [BR:
cdy03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
F3K33_12655
Transporters [BR:
cdy02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
F3K33_12655
Antimicrobial resistance genes [BR:
cdy01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
F3K33_12655
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YknX_C
Beta-barrel_RND_2
RND-MFP_C
BSH_RND
CzcB_C
BSH_CzcB
HH_EMRA
BSH_CusB
Beta-barrel_RND
TPR_MLP1_2
HH_MFP_RND
BSH_ALG44
HH_AprE
HH_YBHG
KIF9
Prefoldin_2
HH_CzcB
BSH_Fcp1
HH_AAEA_pHBA
PTS_EIIA_1
CC_Bre1
Bcr-Abl_Oligo
CT398_CC
HOOK
Peptidase_M23
Beta-barrel_RND_rel
Motif
Other DBs
NCBI-ProteinID:
QES73625
LinkDB
All DBs
Position
2790421..2791716
Genome browser
AA seq
431 aa
AA seq
DB search
MKNVKKIVIYAVIVIAVIGCAAVAKTKLFTAKKEATTAVAASKTTVEVQIAKAQEKSLGD
SYKATLEAYQQGIVTSKIAAKVVAVSIENGQYVNAGDTIATLDDQDIQNSIKTAQAQVEV
SEQQVNSTQQQLNSSQVTLQKLQILMDDAQRNYDRQKTLFDGGAISKTDLESAEKALNTS
KADYSSGLASIESAKASIESSKASLEAQKVNLQKAQNDLANTVIKAPISGVISDKTLNVG
QMASQGAALAKVNDISSVYATIQVPQEKITGVKIGQAATITVDGNDKTYDGTIEAMDSAA
DATTRVFNCKVKIDNGDKSLLPGIFGKVQLISEEKAQVITVPISALAGNEGDYSVFLNDN
GIAKKQKITIGETNENNVEITDGIKEGDQVICTNISTLQEGSEVDAIIKDDSSSDNTASE
QDGGADDTTNK
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaatgtaaaaaaaatagttatatatgctgtaattgttatagctgtaataggctgt
gctgcagtagctaaaactaagttattcacagctaaaaaagaagcaaccactgccgttgct
gctagtaaaactactgttgaagtacagatagccaaagcacaagaaaaaagtttaggggat
tcatataaagcaacactagaagcttatcagcaaggaatagtaactagtaagatagcagca
aaggttgttgctgtgtcgattgaaaatggacaatatgtaaatgctggtgatactatagct
acgcttgatgaccaagatatacaaaatagtataaaaactgcacaagctcaggtagaagtt
agtgagcagcaagtaaattcaacgcagcaacaactaaattcatcgcaagtaacgctacag
aaattgcaaattcttatggatgatgcacagcgtaattatgatagacaaaagacccttttt
gatggaggagctatatcaaaaacagatcttgaatcagctgaaaaagccctaaacacttct
aaagctgattatagttcaggattagcaagtattgaatcagcaaaagcaagtattgaaagt
tcaaaagcgagtttagaagcacaaaaagtaaatttacagaaggctcaaaatgatttggct
aacacagtgattaaagcgcctataagcggagtcataagcgataaaaccttaaatgtagga
cagatggcatctcagggggcggctcttgcaaaagttaatgatatatcgtctgtatatgca
acaatacaagtgccacaagagaaaataactggagtaaaaataggtcaagctgcaacaatt
accgtagatggaaatgataaaacatatgatggcactattgaagctatggactctgcagcg
gatgctacaactagagtattcaattgtaaagtaaaaatagataatggcgataagtcactg
ttacctggtatttttggaaaggtacagcttattagcgaggaaaaagcacaagttataact
gttccaattagtgctttagctggtaacgaaggagattattctgttttcttaaatgataat
ggaatagctaaaaagcaaaaaattacaattggtgaaactaatgaaaataacgttgaaata
acagatggtattaaagaaggggatcaggtaatatgtactaatataagtacgcttcaagag
ggtagtgaagtagatgcaattataaaggacgatagttcttcagataacacagcttctgaa
caagatggcggtgcagatgatacaacaaataagtag
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