Cardinium endosymbiont of Sogatella furcifera: CE557_759
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Entry
CE557_759 CDS
T05597
Name
(GenBank) NAD-dependent
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
cec
Cardinium endosymbiont of Sogatella furcifera
Pathway
cec03030
DNA replication
cec03410
Base excision repair
cec03420
Nucleotide excision repair
cec03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cec00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CE557_759
03410 Base excision repair
CE557_759
03420 Nucleotide excision repair
CE557_759
03430 Mismatch repair
CE557_759
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cec03032
]
CE557_759
03400 DNA repair and recombination proteins [BR:
cec03400
]
CE557_759
Enzymes [BR:
cec01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
CE557_759
DNA replication proteins [BR:
cec03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
CE557_759
DNA repair and recombination proteins [BR:
cec03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
CE557_759
NER (nucleotide excision repair)
GGR (global genome repair) factors
CE557_759
MMR (mismatch excision repair)
DNA ligase
CE557_759
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
CE557_759
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
OB_DNA_ligase
HHH_2
BRCT
HHH_5
DNA_ligase_ZBD
HHH
PTCB-BRCT
BRCT_2
Nlig-Ia
Prok-RING_1
Motif
Other DBs
NCBI-ProteinID:
AXI24553
LinkDB
All DBs
Position
1:976531..978519
Genome browser
AA seq
662 aa
AA seq
DB search
MESFDVKEEIKRLVDLINYYNECYFQKGISEISDYAYDQLLERLVQLEAAYPHFKYPNSP
TEVIGERPCFSAVYHQTPMLSLAKTYSEKEIDQFSTRVQKMVLNAAVDFICEPKIDGVAL
SILYKAGQLVRVVTRGDGQRGDDVTHHVGQCLPLPQVIQDAPCAEFEVRGEAFMSKAVFK
ALNARRQAQGEPLWANPRNITAGTLKTLDVALVKERQLAFHGYSFYASSYDCLTQAAALM
LLDRLGFSTTFKLCHNVKEIMAYIHYWAQHKKELPVDVDGIVIKVNNLHQQRLIGMTAKS
PRWAIAYKYQPEMAHSILEKVSFQVGRTGAVTPVAHFSPIPLAGTMVRRASLHNAAEIAR
QDLYLGDTIFIEKGGDIIPKVVGVDRARRNKTSQPIIFIDVCPACGTSFHRAPGAVVYYC
PNKQQCLPQLKGALLHFAHRRAMDIDTLGPKTVDALFAAKLVQTAADLYTLRYETVNQLA
GFQALSTQKLLANIQASKVKPFDNLLFALGIKHVGETVAKQLAWHFRSMARLQRATKAEL
LQLPDIGEKIVQSLLDYFQDPYEQAMLDRLKVAGLQFALPEVVDTVLPLSSKSFIISGTF
QRYTREALIQLIEQAGGRVLSAVSTKADYLVAGTKAGPSKLAKAMQWAIPILEEDELIKM
IQ
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atggaatcatttgacgtgaaggaagaaatcaaacgtttagttgatttgattaactattac
aatgagtgttattttcaaaaagggatctctgagatttccgactatgcatatgaccaattg
ttagaacggttggtgcaattggaggcggcttatccccatttcaagtaccctaactctccc
actgaggttattggagaacgtccttgtttttcagctgtctaccaccaaacccctatgctt
tctttggctaaaacctattcagaaaaagagatagaccaatttagtacaagggtgcaaaaa
atggttctaaatgcggctgtagattttatatgtgaacctaaaatagatggggttgcttta
agcatcctgtataaagcaggtcagttggtacgtgtagtgacacgtggcgatgggcaaaga
ggagatgatgtaacccaccatgtgggtcaatgtttgcccttgccccaagtcattcaagat
gccccatgtgccgaatttgaggtgcgtggagaagcttttatgtccaaggctgtttttaag
gcattaaatgccagacgtcaagcacaaggagaacctttatgggctaatccccgtaacatt
actgcaggtacattaaaaacattagatgtagctttggttaaagagcgtcaattggccttt
catgggtatagtttttatgcctcctcttatgactgtctgacgcaagcagcagccttaatg
ctgttagatagattgggtttttccactacgtttaagctgtgtcataatgtgaaggagata
atggcgtacatccattattgggcgcaacataaaaaagagttacccgttgatgtagatgga
atagtgatcaaggtcaataacctccatcagcaacgtctgattggtatgactgcaaagtcg
cctcgttgggccattgcctataaatatcaaccagagatggcccattccattttagaaaaa
gtaagctttcaggtaggaaggactggtgcagtaacgccagtagcgcattttagtcctatt
ccattggcaggcactatggtccgtcgtgcttctttgcataatgcagctgagatcgctagg
caagatctatatttgggtgacacgatttttattgaaaaaggaggcgacattattcccaag
gtagtaggtgtggatagggcgcgtcgcaataaaaccagtcagcctattatttttatagat
gtctgtcctgcttgtggcacatcgttccatagagctccaggagcagttgtctactattgt
cccaataagcagcaatgtttacctcaattaaaaggtgccttattgcattttgcccatcga
agggctatggatatagatacattagggcctaagacagtcgatgcattatttgcggccaag
ttggttcaaacggcagcagacctctatacattgcgctacgagaccgtcaaccagttagca
ggatttcaagcgctatctacacaaaaattactagccaatattcaggcgtcaaaggtcaaa
ccttttgacaacctattgtttgccttaggcattaagcatgtaggggagacggtagccaag
caactggcatggcactttaggtctatggcccgtttgcaacgggctactaaagcagaactc
ttacagctaccagatattggagagaagattgtgcaaagcctattggattattttcaggac
ccttacgagcaagctatgcttgaccgactgaaagtagccgggttacagtttgccctacca
gaggtagtagataccgttttgccattatcctcaaaaagttttattatttcaggtaccttt
caaagatataccagggaggcattgattcaattaattgaacaagcaggaggcagggtcttg
tctgctgtttctactaaggccgattacttagtagcaggtaccaaagctgggccgtcaaag
ttggccaaggccatgcaatgggcgattcccattttagaagaagatgagcttataaagatg
atacaatga
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