Dickeya fangzhongdai ND14b: LH89_14910
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Entry
LH89_14910 CDS
T03347
Symbol
metH
Name
(GenBank) B12-dependent methionine synthase
KO
K00548
5-methyltetrahydrofolate--homocysteine methyltransferase [EC:
2.1.1.13
]
Organism
ced
Dickeya fangzhongdai ND14b
Pathway
ced00270
Cysteine and methionine metabolism
ced00450
Selenocompound metabolism
ced00670
One carbon pool by folate
ced01100
Metabolic pathways
ced01110
Biosynthesis of secondary metabolites
ced01230
Biosynthesis of amino acids
ced04981
Folate transport and metabolism
Module
ced_M00017
Methionine biosynthesis, aspartate => homoserine => methionine
Brite
KEGG Orthology (KO) [BR:
ced00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
LH89_14910 (metH)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
LH89_14910 (metH)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
LH89_14910 (metH)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
LH89_14910 (metH)
04980 Cobalamin transport and metabolism
LH89_14910 (metH)
Enzymes [BR:
ced01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.13 methionine synthase
LH89_14910 (metH)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Met_synt_B12
S-methyl_trans
Pterin_bind
B12-binding_2
B12-binding
MtrH
Motif
Other DBs
NCBI-ProteinID:
AIR70430
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All DBs
Position
3350980..3354663
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AA seq
1227 aa
AA seq
DB search
MANRLQALQQQLAQRIMILDGGMGTMIQSYRLQEEDYRGERFADWQCDLKGNNDLLVLSK
PEVITAIHNDYLAAGADILETNTFNATRIAMADYEMEALSAEINTVAARLARACADEWTA
RTPERPRYVAGVLGPTNRTASISPDVNDPAYRNVSFDQLVEAYRESTRALVEGGVDIILI
ETIFDTLNAKAAIFAVETEFEALGVTLPVMISGTITDASGRTLSGQTTEAFYNSLRHARP
LSFGLNCALGPDELRQYVAELSRIAECYVTAHPNAGLPNAFGEYDLDADEMARQIGEWAQ
SGFLNIIGGCCGTTPEHIAAMVKAVDGVAPRALPALPVACRLSGLEPLNIGDDTLFVNVG
ERTNVTGSAKFKRLIKEEKYNEALDVARQQVESGAQIIDINMDEGMLNAEAAMVRFLNLI
AGEPDIARVPIMIDSSKWDVVEAGLKCIQGKGIVNSISMKEGVEAFVHHARLVRRYGAAV
VVMAFDEVGQADTRARKIEICRRAYQILTEEVGFPPEDIIFDPNIFAVATGIDEHNNYAV
DFIEACADIKAQLPHALISGGVSNVSFSFRGNEPVREAIHAVFLYYAIRNGMDMGIVNAG
QLAIYDDLPAELRDAVEDVVLNRRDDGTERLLAIAEKYRGSKSDDDSNKGEAEWRGWPVR
KRLEYALVKGITEFIEQDTEEARAQSTRPIEVIEGPLMDGMNVVGDLFGAGKMFLPQVVK
SARVMKQAVAYLEPFIQASKEQGSSAGKILLATVKGDVHDIGKNIVGVVLQCNNYEIIDL
GVMVPTDKILKTAREENVDIIGLSGLITPSLDEMVNVAKEMERQGFTLPLLIGGATTSKA
HTAVKIEQNYSGPTVYVQNASRSVGVVSALLSDSQRDDFVARIRKEYETVRIQHGRKKPR
TPPVALGVARDNAMPIDWESYTPPVAHRLGVQPVSAGIETLRNYIDWTPFFMTWSLAGKY
PNILEDEVVGEEAKRLFADANAMLDTLSASGTLNPRGVVGLFPANRVGDDIEIYTDERRT
EVLTVSHHLRQQTEKTDFPNYCLADFVAPKTSGKPDYFGAFAVTGGLEEDELAAQWEAQH
DDYNKIMLKALADRLAEAFAEYLHERVRKVHWGYAPNENLGNDELIRENYQGIRPAPGYP
ACPDHTEKATIWQLLDVDNTVGMKLTESYAMWPGASVSGWYFSHPDSKYFAVAQIQRDQV
EDYAARKSLPIDEVERWLAPNLGYDAD
NT seq
3684 nt
NT seq
+upstream
nt +downstream
nt
atggcaaatcggttacaggcattacagcagcagctggcgcaacgcattatgattctggac
ggcggcatgggcaccatgatccagagctaccgtctgcaggaagaagattaccgcggcgaa
cgttttgccgactggcagtgcgacctgaaaggcaataacgacttgctggtgctgagtaaa
ccggaggtgatcaccgccattcataacgattatctggcggcgggcgcggatattctggaa
accaacaccttcaacgccacccgcatcgccatggccgactacgagatggaagcgctgtcg
gcggaaatcaataccgtcgccgcccggctggcgcgcgcctgcgccgatgagtggacggcg
cgtacgccggagcgcccgcgctatgtcgccggggtgctggggccgaccaaccgcaccgcg
tcgatctcgccggacgtcaatgacccggcgtaccgtaacgttagcttcgaccaactggtg
gaagcataccgcgaatcgacccgcgcgttggttgaaggcggcgttgatatcatcctgatc
gaaaccattttcgacaccctaaacgccaaagccgccatttttgcggtagaaaccgaattc
gaagcgctgggcgtcacgctgccggtgatgatctccggcaccattaccgatgcctccggc
cgtaccctgtccggccagactaccgaagcgttttataactcgctgcgccacgcccggccg
ctgtcattcggccttaactgtgcgctggggccggacgaactgcgtcagtacgtggcggaa
ctgtcgcgcatcgccgagtgctacgtgaccgcgcaccccaacgccggcttgccgaacgct
tttggcgaatacgatctggatgcggacgagatggcgcgccagattggcgagtgggcgcag
tccggcttcctgaacattatcggcggatgctgcggcaccacgcctgagcatatcgccgcg
atggttaaagccgttgacggcgtggcgccgcgcgcgttgccggcgctgccggtggcctgc
cgcctgtccgggctggagccgctgaacatcggcgacgacacgctgttcgttaacgtcggc
gaacgtaccaacgttaccggttccgctaaattcaagcgcctgatcaaagaagaaaagtac
aacgaggcgttggacgtggcgcgtcaacaggtggaaagcggcgcacagatcatcgatatc
aacatggacgagggcatgctcaacgccgaagcggcgatggtgcgtttcctcaacctgatc
gccggcgagccggatatcgcccgggtgccgatcatgatcgactcctccaagtgggacgtg
gtggaagccgggctgaagtgtattcagggcaagggcatcgtcaactcgatttcgatgaaa
gaaggcgtggaggcttttgtgcatcacgcccggctggtgcgccgttacggcgccgccgtg
gtagtgatggcgtttgatgaagtggggcaggcggatacccgcgcgcgcaagattgagatt
tgccgccgcgcctaccagatcctgaccgaagaagtcggtttcccgccggaagacatcatt
ttcgacccgaacatttttgccgtcgctaccggcattgatgagcacaacaattatgcggtg
gactttatcgaggcctgcgccgacatcaaagcccaactgccgcacgcgctgatttccggc
ggcgtgtccaacgtgtcgttctcgtttcgcggcaacgagccggtacgcgaggcgattcac
gccgtgtttctgtattacgccatccgcaacggcatggacatgggcatcgtcaacgccggt
cagctggcgatctacgatgatttacccgccgagctgcgcgacgcggtggaggacgtggtt
ctcaaccggcgcgacgacggcaccgaacggctactggcgattgccgagaaataccgcggc
agcaaatccgacgacgacagcaacaaaggcgaggccgaatggcgcggctggccggtgaga
aaacggctggagtacgcgttggtcaaaggcatcaccgagtttatcgagcaggacaccgaa
gaagcgcgggcgcagtcgactcgccctatcgaagtgatcgaggggccgctaatggacggc
atgaacgtggtcggcgacctgttcggcgccggcaaaatgttcctgccgcaggtggtgaag
tcggcgcgagtgatgaagcaggcggtggcgtatctggagccgttcattcaggccagcaaa
gagcagggttccagcgccggcaagattctgctggcgacggtgaagggcgacgtacacgac
atcggcaagaacatcgtcggcgtggtattgcagtgcaacaactatgaaattatcgatctg
ggcgtgatggtgccgaccgacaagatcctcaagaccgcgcgcgaggagaatgtcgatatc
atcggcctgtcggggctgattacgccgtcgctggatgaaatggtcaacgtcgccaaagag
atggagcgccagggctttacgctgccgttgctgatcggcggcgccaccacttccaaggcg
cacaccgcggtgaagatcgaacagaactacagcggcccgacggtctacgtgcagaatgcg
tcgcgctcggtgggcgtggtgtcggcgctgttgtcggacagccagcgcgatgactttgtg
gcgcgtatccgcaaagaatacgaaacggtgcgcatccagcacggtcgcaaaaaaccgcgc
acgccgccggtggcgctgggcgtggcgcgcgacaacgccatgccgatcgactgggaaagc
tatacgccgccggtagcgcatcgcctcggcgtgcagccggtttccgccggcattgaaacc
ttgcgtaactatatcgactggacgccgttctttatgacctggtcgctggcgggcaaatac
cccaacattcttgaagacgaggtggtgggcgaggaagccaagcgcctgtttgccgacgcc
aacgccatgctggataccctatcggccagcggcacgttgaacccgcgcggggtggtgggg
ttgttcccggccaaccgggtgggcgatgacatcgaaatctataccgacgagcgtcgtacc
gaggtgctgaccgtcagccatcatctgcgtcagcaaaccgaaaagaccgattttcccaac
tactgtctggcggattttgtcgcgccgaaaaccagtggcaagccggattatttcggcgcg
ttcgcggtgaccggcgggctggaagaggacgagctggcggctcagtgggaagcgcagcac
gacgactacaacaagatcatgctcaaagcgctggcggaccggctggcggaagcgttcgcc
gaatacctgcacgagcgggtgcgcaaggtccactggggctacgcgccgaacgagaacctc
ggcaatgacgaactgatccgcgagaactatcagggcatccgcccggcgccgggctacccg
gcctgtccggaccacaccgaaaaagcgaccatctggcaactgctggacgtggacaatacc
gtcggcatgaaactcaccgagtcctacgccatgtggccgggcgcgtcggtgtccggctgg
tacttcagccacccagacagcaagtatttcgccgtggcgcaaattcagcgtgatcaggtg
gaagattacgccgctcgtaaatcgttgccgatcgacgaggtggagcgctggctggcgccg
aatctggggtatgatgcggattga
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