Dickeya fangzhongdai ND14b: LH89_17660
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Entry
LH89_17660 CDS
T03347
Name
(GenBank) AMP-dependent synthetase
KO
K03367
D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:
6.1.1.13
]
Organism
ced
Dickeya fangzhongdai ND14b
Pathway
ced00470
D-Amino acid metabolism
ced00552
Teichoic acid biosynthesis
ced01100
Metabolic pathways
ced01503
Cationic antimicrobial peptide (CAMP) resistance
ced02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
ced00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
LH89_17660
09107 Glycan biosynthesis and metabolism
00552 Teichoic acid biosynthesis
LH89_17660
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LH89_17660
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
LH89_17660
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
ced01504
]
LH89_17660
Enzymes [BR:
ced01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.13 D-alanine---poly(phosphoribitol) ligase
LH89_17660
Antimicrobial resistance genes [BR:
ced01504
]
Gene sets
CAMP resistance modules
Cationic antimicrobial peptide (CAMP) resistance, dltABCD operon [MD:
M00725
]
LH89_17660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
AIR70949
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All DBs
Position
3973923..3975359
Genome browser
AA seq
478 aa
AA seq
DB search
MNLHSELQELQDFLRTALLEPANPHQLAISGSDEAMTWQQLSVAVTDWSQRYQQCRQPAG
TPVVLYGHQQAEFAVAIYSCLLHNIPYIPVDCIYPQERLKEICQLASAPYYYDVATKQFV
TTGEAGQVLVEQDLAYIMFTSGSTGKPKGVQIGRESLWHFMKWVRQDFSLPEVPVLMNHA
VFSFDLSLIPLLANLATGGHIVLNAKEDIAAENWLERLKNNGVSVWVSTPSFAYQRLLSP
QFNSEYLPELSVFVFIGEVLNKALVKQLRRRFPHAKILNSYGPTEATIATTVIEITDEIL
HSENDLLPIGAMMPDSRMEITAEGELIIWGKNVMRGYLGLSKENAEKLLHRESEAFRGYR
TGDLGYEDDGILYCQGRNDSQIKLNGYRIEINEIENRLLAMSDISEAVVLPLMKSGGGVL
RIAAFCVTNLAPEAIKTSLSKVIPPYMVPSQIIIKDALPLNPNGKIDRKLLDTHARTN
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgaaccttcactccgagcttcaggaactgcaagatttcttgcgtacggcattacttgag
cccgcgaacccacatcagttggcgattagcggcagtgacgaagccatgacctggcaacag
ctatccgtagccgttaccgactggtcgcagcgctatcagcagtgccggcagcctgccggt
acaccggtggttttatacggacatcagcaggctgaatttgccgtggctatctatagctgc
ctattgcataacattccgtatatcccggtggactgcatctatcctcaggagcggcttaaa
gagatttgccagctggcgagtgctccttactattacgatgtggcgacaaagcagttcgtt
acaaccggtgaggctggtcaggtgctggtcgagcaggatctcgcctatatcatgttcacc
tccgggagcaccggaaagcccaaaggggtgcagatcggacgtgaaagcctgtggcacttc
atgaagtgggtacgtcaggacttttcactgcctgaagtgccggtgttgatgaaccatgcg
gtgttcagcttcgatctttcgctgatcccgctgctggcgaatctggcaaccggggggcac
atcgttctgaatgcgaaagaggatatcgctgcggaaaactggcttgagcgactgaaaaac
aacggcgtttccgtctgggtttcaacgccttcgtttgcctaccagagattgctctccccg
cagttcaacagtgaatatttacctgaactcagcgtcttcgtgttcatcggcgaagtgtta
aacaaagcgctggtaaaacagttacgccgccgcttcccgcacgccaaaattcttaactcc
tatggcccaacggaagcaaccatcgcgacaaccgtcatcgagatcaccgatgaaatcctg
cacagcgaaaacgacctgctgccgatcggcgcgatgatgccggactccagaatggaaatt
accgctgaaggcgagttgattatttggggtaaaaacgtgatgcgcggctacctcgggctc
tctaaggagaacgcggagaaattgctgcatcgggagagtgaagcgttccggggctacaga
accggcgatctgggttacgaagacgatggtatcctgtactgtcagggccgaaatgacagc
cagatcaaactgaatggctaccgcatcgaaataaacgagattgaaaatcgcctgctggcg
atgtccgatatcagcgaagcggtggtgctgccgctgatgaaatcgggcggcggcgttctg
cgtattgcggcgttctgcgtgacgaacttagcccctgaagcgattaaaacctcactttcg
aaggtaattccaccctatatggtgccttctcaaattataattaaagacgcgttgccgctt
aatcctaacggcaaaatcgaccgtaagctgctggatacccatgcccgcaccaactga
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