Cellvibrio sp. KY-GH-1: D0C16_04990
Help
Entry
D0C16_04990 CDS
T06422
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
ceg
Cellvibrio sp. KY-GH-1
Pathway
ceg01501
beta-Lactam resistance
ceg01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
ceg00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
D0C16_04990
01503 Cationic antimicrobial peptide (CAMP) resistance
D0C16_04990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ceg03036
]
D0C16_04990
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ceg02000
]
D0C16_04990
01504 Antimicrobial resistance genes [BR:
ceg01504
]
D0C16_04990
Chromosome and associated proteins [BR:
ceg03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
D0C16_04990
Transporters [BR:
ceg02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
D0C16_04990
Antimicrobial resistance genes [BR:
ceg01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
D0C16_04990
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BSH_RND
Beta-barrel_RND
HH_MFP_RND
RND-MFP_C
BSH_CusB
Beta-barrel_RND_2
BSH_CzcB
HH_EMRA
HH_AAEA_pHBA
BSH_YhbJ
HH_CzcB
HH_CyaD
YknX_C
FSAP_sig_propep
Motif
Other DBs
NCBI-ProteinID:
QEY15388
LinkDB
All DBs
Position
complement(1176164..1177315)
Genome browser
AA seq
383 aa
AA seq
DB search
MRSRIRFRSVLLVSLLGLVLSACDEKNQAAKPAGGPVEVGVVPVIRGDVPLEAELPGRTN
AFRKAEVRPQVSGIIQKRLFTEGSVIKAGMPLYQIDPSSYEAALSSAKAELARAEANLAA
AVARESRYKSLVAIKAISQQEYDDALATLGQSKAGVQVAKAGVTTAKINLDYTRVLAPID
GVIGKSNVTEGALVNAGQADVLAEIQQVDPIYVDVSQSADQLVQLRRQMAEGSVAALNSA
KVRLLLGDGTAYEHIGSLQFAEVGVNESTGTVILRAQFPNPDRLLLPGMFVRTTLEEGIQ
ANAMLVSQRGVTRDRTGNATAMIVNKERVVEVRNITVARTVGDQWLVLTGLDVGDQVIVE
GLQKAKPGAPAKAVAAASSKIGE
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgaggtctcgcattcgctttaggtcagtgttgctggtgtccctgttgggcttggtgttg
tcggcgtgtgatgagaaaaaccaggcagctaagccagcaggcggtccggtagaggttggg
gtagtcccggtgattcgtggtgatgtaccgctggaggcagaacttccgggtcgaaccaat
gcgtttcgcaaggcagaggttcgcccacaagtgagcggaattatccagaagcggttgttt
acagagggtagtgtgatcaaagcgggtatgcctttgtatcaaatagatccttctagctat
gaggctgccttgagcagcgccaaagcagagctggcgcgcgctgaagctaatttggcggcc
gctgttgcgcgtgagtcccgctataaaagcctggtggcaatcaaagccattagtcagcaa
gagtatgacgatgccctggcgacccttgggcagtccaaagccggtgtgcaagttgcaaaa
gcaggtgtaactacggccaaaattaatctcgattacacccgcgtgctggctccgattgac
ggtgttattggcaagtccaacgttactgaaggtgccttggtgaatgctggtcaagcggat
gtgctggcggaaattcaacaggttgatccaatttatgtcgatgtttctcaatccgctgat
cagcttgtacaacttcgtcgccaaatggcagaaggaagtgtcgccgctctgaattcggca
aaagttcgtttgttgctgggcgatggtactgcctatgagcatataggcagtttgcaattt
gccgaggttggcgtgaacgaatccactggcaccgttattttgcgtgcgcagtttcccaat
ccggatcgtctattgctgcccggtatgtttgtacggactaccttggaagaaggtatccag
gctaatgctatgttggtttcgcagcgcggcgtaacgcgcgatcgcactggtaacgccaca
gccatgattgttaataaagagcgtgtggttgaagtgcgcaatattaccgttgctcgtact
gtgggggatcaatggctggtattaaccggattggatgtgggtgaccaggtaattgtggaa
ggcctgcaaaaagcgaagcccggtgctcccgcaaaagcggttgctgcagctagtagcaaa
atcggggagtaa
DBGET
integrated database retrieval system
