Cellvibrio sp. KY-YJ-3: D0B88_10855
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Entry
D0B88_10855 CDS
T06234
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
cek
Cellvibrio sp. KY-YJ-3
Pathway
cek01501
beta-Lactam resistance
cek01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
cek00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
D0B88_10855
01503 Cationic antimicrobial peptide (CAMP) resistance
D0B88_10855
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cek03036
]
D0B88_10855
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cek02000
]
D0B88_10855
01504 Antimicrobial resistance genes [BR:
cek01504
]
D0B88_10855
Chromosome and associated proteins [BR:
cek03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
D0B88_10855
Transporters [BR:
cek02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
D0B88_10855
Antimicrobial resistance genes [BR:
cek01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
D0B88_10855
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-barrel_RND_2
Beta-barrel_RND
RND-MFP_C
BSH_CzcB
BSH_RND
YknX_C
CzcB_C
BSH_CusB
BSH_LcnD
HH_MFP_RND
BSH_YknX
BSH_ALG44
Motif
Other DBs
NCBI-ProteinID:
QEY14361
LinkDB
All DBs
Position
2544174..2545241
Genome browser
AA seq
355 aa
AA seq
DB search
MWGAFVLTANAQPAASAATEVIVQAASTAQLTTTIEALGDLRANETITLTSNETKKITRI
NFDDGQRVEKGQILVEMTSREESALLEEARFNTDEAKKQLDRVRELAKRGAASQSELDQR
IREFEAARARYNATESRLKDLVLLAPFSGVVGLRQVSVGALVSPGNIITTLNDDSKMKLD
FTVPAIYLRSLATGLPIVAKSRDLGNKEFQGEVVSIDNQIDEVTRAIKVRALLDNKNHEL
KQGMLMLVDLKAASRTALVISESALVPLASNNFVFVLQDAENGPVVERRQITIGERLPGS
VEVLSGLNPGEKIVTHGLQKIRPGQKVQVLAEEKPFAEQTGEALHLSDLIKSKNN
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
gtgtggggtgcttttgtgctcactgcaaacgcccaaccagcggcgagcgctgcgacggaa
gtgattgtgcaagcagcaagtacagcgcagctcacgaccacaattgaagcgctaggcgat
ttgcgtgcgaatgaaacaattactctcacctccaatgaaaccaaaaaaatcacccgtatt
aattttgacgatggtcagcgtgtcgagaagggccagattttggttgaaatgaccagccgc
gaagagtcagcgctgcttgaagaagcgcgcttcaataccgatgaagccaagaagcaactt
gatcgtgtgcgcgaattagccaagcgtggtgctgcttcgcagtcagagcttgatcagcgc
atccgcgaatttgaagcagcgcgtgcacgttacaacgcaactgaatcgcgcttaaaagat
ctcgttttgcttgcgccgttttctggtgtggtgggcttgcgacaagtcagtgtcggtgcg
cttgtgtcgccaggtaatattattaccaccctgaacgatgactctaaaatgaaattggat
ttcactgtgccagctatttacctgcgcagtttggccaccgggctacccattgtggcgaag
agtcgtgatttgggtaacaaggaatttcaaggtgaggtagtcagtattgataaccagatt
gatgaagtgactcgcgccatcaaagtgcgtgcactgttggacaataaaaatcatgagttg
aaacaaggcatgttaatgctggtggatttaaaagcggcatcgcgtacagcattggttatt
tctgaatccgctttggtgcctttggccagcaacaattttgtattcgtgttgcaggatgca
gaaaatggtccggtggtggagcgtcgccaaattaccattggtgaacgcttgcctggctct
gtggaagtgctgagtggattaaatccgggcgaaaaaattgtgacgcatggtttacaaaaa
attcgtccgggacagaaagtgcaagttcttgccgaagaaaaaccttttgcggaacagacg
ggtgaggcattacacctgtctgacttaattaaatccaaaaataactga
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