KEGG   Caenorhabditis elegans (nematode): CELE_F23B2.4
Entry
CELE_F23B2.4      CDS       T00019                                 
Symbol
daf-10
Name
(RefSeq) Intraflagellar transport protein 122 homolog
  KO
K19656  intraflagellar transport protein 122
Organism
cel  Caenorhabditis elegans (nematode)
Brite
KEGG Orthology (KO) [BR:cel00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:cel03037]
    CELE_F23B2.4 (daf-10)
Cilium and associated proteins [BR:cel03037]
 Primary cilia and associated proteins
  Intraflagellar transport (IFT) complex A
   CELE_F23B2.4 (daf-10)
SSDB
Motif
Pfam: Beta-prop_IFT122_2nd Beta-prop_IFT122_1st WD40 Zn_ribbon_IFT122 Beta-prop_EML_2 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz EIF3I Beta-prop_CAF1B_HIR1 ANAPC4_WD40 WDR55 PEP5_VPS11_N Beta-prop_RIG_2nd TPR_GEMI5 NBCH_WD40 B-prop_COPA_B_2nd Beta-prop_TEP1_2nd eIF2A TPR_IFT80_172 Beta-prop_WDR19_1st TPR_IF140-IFT172 Beta-prop_Vps41 Beta-prop_IFT140_1st Zn_ribbon_IFT122_C WD40_MABP1-WDR62_2nd WDR90_beta-prop_4th Beta-prop_WDR90_POC16_2nd Beta-prop_WDR35_TULP_N Beta-prop_EML TPR_COPA_B
Other DBs
NCBI-GeneID: 184883
NCBI-ProteinID: NP_501591
WormBase: WBGene00000906
Ensembl: WBGene00000906
UniProt: G5EFW7
LinkDB
Position
IV:complement(9136933..9146211)
AA seq 1192 aa
MRPNLLWVDKILDENNEAGVCIYDLAFKPDGSELLLAADNKVYLFDVNEGGQMQTLKGHK
DLVYTVAWSHNGELFASGGADKLVILWNEKHEGTLRYSHTDVIQCMMFNPCNQILLTCAL
NEFGLWSTADKNVIKQRSVVRCCSCAWNTDGTIFAIGHGDGTITLRKGTNATEEPSIIIQ
RDNEPIWGIAFSSNRTFASRDSQGNPMGIDEIMAVIDWNKTLSFYSLDGTFIESKNLEFE
PHCISYCLNGEYLLIGGSDKILKIYTRKGVLLGTVAQMDHWIWSVTVRPNSQTVAMGCVD
GTIACYNLVFSTVHCVDHARYANRKSMTDVFVQNLEYRTSSNICCHDLVKKMSLYDTKLA
VQLSDKIQIYKQTGGVSKNERRKQLKYTLQDTIRKDLSFSLMVVTHGHLVVCNDEKLECY
DFKGIKKRSWNMKSIVRYLRVLGGPAHRETLVLGTTDGGVYKVFIDNDYPILLDSRKTAI
KCIDINANRTVLASIEDTLVCKWSDIATGETLLQEPGCYSVVFNTVNENLFAFTTNNMLH
VRTLAAPGHTTRGVGYVLGFVKNRTFCLVQYNLIPLEVPYTIHLYQYIERGDFKEALRIA
CLGVVKNDWKYLANKALDALEFDVARKAYKRVRDRKMLRMVWELKKMKSNGEPDAILRAT
ILAYTKKFREAAKIFKENGFENRAMELFTDMRMFDDVQEVMTTASGETKKMLMRKRASWA
RDANQPKIAAEMLISSGDLDKAALLIIDNDWLELAIEISHKIDRSDLETMKKLSAYFIRK
HEFGLASRIFQSINDMKSIVDMHVNAGHWTDAFAIADRHPKYVEDVYLPYARFLAERDRF
EEAQKAFHRAGKEQEAMHVLEQLTSNSVNENRFADAGFYYWLLSQQYLDRSQTEENLTLL
NKAKEAASLADAYYAYYPVFIFCSQPFSFERNENILNMARYLTFTPYIDNISKVFVYFTI
AKIANEMGAYKSARTALDQLTNLRVLPQFELDGQIEVMTLNIRAKPFTDVESMQPMCYRC
GLNNPLLGGMSCIHCETPFIISFVSFDILPLIEFKIENDISFDEAKELIESEPPLSDDDY
NPLRGLKKGIKEIILNRESLSKLEQGHVIIQTFPPPLAPKFLFNVMPSITIAQCKGCNKV
FDLDDFEMACLRKGHCPFCRTSYDRNEAFFVDEEEDEDNTNIPSFGQFSRFS
NT seq 3579 nt   +upstreamnt  +downstreamnt
atgcgaccaaatttactatgggtcgacaaaattttagacgaaaacaatgaagctggagtt
tgcatttatgatctcgcattcaaaccagatggctctgaacttttgttggctgcagataac
aaagtttacttgtttgatgttaatgaaggtggtcaaatgcaaactttgaaaggacacaaa
gatctagtatacacagtcgcatggtcacataatggcgaactatttgcatcaggtggtgct
gataaattggtaattttgtggaatgagaaacacgagggaactttgagatacagtcacaca
gacgtaatccaatgtatgatgttcaatccatgcaatcaaattctattaacttgtgcattg
aatgagtttggattatggtccactgctgataaaaatgtgataaaacaaagaagtgtagtg
agatgttgtagttgtgcatggaatacagatggtaccatatttgcaataggtcatggagat
ggtacaatcacactgagaaagggaactaatgcgaccgaggaaccgtcaataataattcaa
cgtgataatgaaccaatttggggtattgcattctcatcaaatcgcacatttgcatcaaga
gattcacaaggaaatccaatgggtattgatgaaataatggctgtaattgattggaataag
acactttctttttattcacttgatggaacgtttattgaatcaaagaatttggaatttgaa
ccgcattgtatcagttattgtttaaatggagaatatttattgattggtggatcggataag
attctaaaaatatacacaaggaaaggagtacttctcggaacagttgctcaaatggatcat
tggatttggtcagtgacagtacgtccaaattctcaaactgttgccatgggatgtgttgat
ggaactatagcatgctataatttggtattctcaacggttcattgcgttgatcacgcaaga
tatgcaaatcgaaaatcaatgacggatgtatttgttcaaaatctggagtatcgtacaagt
tccaatatttgttgtcatgatcttgtcaagaaaatgtcactttatgacacaaagttggct
gttcagctttctgacaaaattcaaatatataagcaaactggaggtgtgtctaaaaatgaa
aggagaaagcagctcaagtacacattacaagacactattcggaaggatttgtcattttca
ttaatggtagttacacacggccatctggtggtttgcaatgatgaaaaattagagtgttat
gattttaaaggaatcaaaaaaagatcatggaatatgaagtcaattgtcaggtatttaaga
gttctcggtggtcctgctcatcgtgaaactcttgtactaggaaccacagatggcggtgta
tataaagtattcattgacaatgattacccaattcttttggattcccgaaagacggctatc
aaatgtattgacataaatgcgaatcgaacagttcttgcatcaattgaagatacacttgtc
tgtaaatggtcagatattgcaacaggagagacattacttcaagaacctggatgttacagt
gttgtatttaatacggttaatgaaaatttattcgcttttacaacaaataacatgcttcac
gtgagaacattagctgctccagggcatacgacaagaggtgttggatatgtattgggattt
gttaaaaatcgaacattttgtcttgttcaatataatttgattcccttggaagttccatat
actatacatctttatcaatatatagaacgaggagatttcaaagaagccctccgaatagct
tgcctgggagttgtgaagaacgattggaagtacttggctaacaaggcattagatgctttg
gaatttgatgttgcacggaaagcttacaaaagagttagagatagaaagatgcttcggatg
gtttgggaacttaagaaaatgaaatcaaacggggaaccggatgccatccttcgtgctaca
atcttggcatacacgaagaaattcagagaagcggcaaaaatattcaaagaaaatggattt
gagaatagagcgatggaactgtttacggatatgagaatgtttgatgatgtgcaggaagta
atgacaacagcatccggagaaaccaaaaagatgttaatgagaaaaagagcaagttgggca
agagatgcaaatcagccgaaaatagccgccgaaatgcttatttcatctggagatttggat
aaagcagctctattgattatagataatgattggttagaattagccatcgaaatatcacat
aaaatcgataggagtgacttggaaactatgaaaaaactttcagcatatttcattagaaaa
catgaatttggtcttgcttcaaggatttttcaaagcattaatgatatgaaatcaattgtg
gatatgcatgttaacgcagggcattggactgatgcatttgcaatagctgaccgacatcct
aaatacgtggaagatgtttatctaccgtatgcaagatttttggcagaacgtgatcgattt
gaagaagcacaaaaagcatttcatagagctggaaaagagcaagaagcaatgcatgttttg
gaacaactaacttcaaattcagttaatgagaatcgatttgctgatgctggtttctactat
tggcttctgagtcagcaatatttggatcgaagccaaactgaagagaacttgacacttctg
aataaagccaaagaagctgcttctttggcggatgcttattacgcatactatccagttttt
atattttgtagtcaaccattttcctttgaacgaaatgaaaacatactcaacatggccaga
tatttgacttttactccatatattgacaacatttcaaaagtatttgtttatttcacaatt
gcgaaaatagcaaatgaaatgggtgcttataaatcagctaggactgcacttgaccagctg
acaaatttaagagttttaccgcaatttgaactggatggtcaaattgaagttatgacattg
aacataagagccaaaccatttacggatgtggaaagtatgcaaccaatgtgttacagatgt
ggtctaaacaatcctctactcggtggaatgtcgtgtattcattgtgaaactccatttatc
atatcattcgtttcattcgatattcttcccctcatcgaattcaaaattgaaaatgatatt
tcatttgatgaagcaaaagaactaattgaaagtgaaccacctctgtctgacgatgattat
aatccattgagaggtctcaaaaagggaatcaaagaaattatcctaaatagagaatcattg
tcaaaactggaacaaggacatgttataattcaaacatttccacctccattggctccgaaa
ttcttatttaacgttatgccaagtataacaattgcacaatgtaaaggatgcaataaggtt
ttcgatttggacgattttgaaatggcatgccttcgaaaaggacattgtccgttttgtaga
acatcatatgatcggaatgaagcatttttcgtcgacgaagaggaagacgaagataatacg
aatattccaagttttggacaattctcaagattctcataa

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