KEGG   Caenorhabditis elegans (nematode): CELE_R03D7.1
Entry
CELE_R03D7.1      CDS       T00019                                 
Symbol
metr-1
Name
(RefSeq) putative methionine synthase
  KO
K00548  5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
Organism
cel  Caenorhabditis elegans (nematode)
Pathway
cel00270  Cysteine and methionine metabolism
cel00450  Selenocompound metabolism
cel00670  One carbon pool by folate
cel01100  Metabolic pathways
cel01230  Biosynthesis of amino acids
cel04980  Cobalamin transport and metabolism
cel04981  Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:cel00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00270 Cysteine and methionine metabolism
    CELE_R03D7.1 (metr-1)
  09106 Metabolism of other amino acids
   00450 Selenocompound metabolism
    CELE_R03D7.1 (metr-1)
  09108 Metabolism of cofactors and vitamins
   00670 One carbon pool by folate
    CELE_R03D7.1 (metr-1)
 09150 Organismal Systems
  09154 Digestive system
   04981 Folate transport and metabolism
    CELE_R03D7.1 (metr-1)
   04980 Cobalamin transport and metabolism
    CELE_R03D7.1 (metr-1)
Enzymes [BR:cel01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.13  methionine synthase
     CELE_R03D7.1 (metr-1)
SSDB
Motif
Pfam: Met_synt_B12 S-methyl_trans Pterin_bind B12-binding_2 B12-binding DUF5817_CT DUF5600
Other DBs
NCBI-GeneID: 174681
NCBI-ProteinID: NP_496353
WormBase: WBGene00010988
Ensembl: WBGene00010988
UniProt: Q09582
LinkDB
Position
II:10926561..10931078
AA seq 1249 aa
MTRSSLFEELAEIAKERIMIIDGAMGTMIQREYMEEEDFRGEILKDHDKPLKGNNDLLSI
TRPDIIYKIHKLYLEAGADFVETNTFSGTTIAQADYRCEHLVHEINYQSALVARRACDDV
GAATGRRRYVCGAIGPTNRTLSISPSVEKPDFRNVTFQELVKAYGDQARSLIQGGVDVLL
VETVFDSANAKAALFAIRTLFEDEGVPEMPVFLSGTIVDMSGRTLSGQTGEAFLVSTKQG
KPMAVGLNCALGAKDMRQFVDNMSKWSDSFIICYPNAGLPNALGGYDETPEEMADVLREF
ARDGLVNIIGGCCGTTPDHINAMYKAVQGITPRVPPQDPHAGKMLLSGLEPSIVGPETNF
VNIGERCNVAGSRRFCNLIKNENYDTAIDVARVQVDSGAQILDVNMDDGLLDGPYAMSKF
LRLISSEPDVAKIPVCIDSSDFDVIIAGLESTQGKCVVNSISLKEGEEKFKERARIIKRY
GAAVVVMAFDEQGQAAETDPKFEICERSYRILTEEVGFNPNDIIFDANILTIATGMEEHS
NYGMYFIEAARMIRENLPGAHVSGGVSNISFSFRGMEAIREAMHSVFLFYAIKAGMDMGI
VNAGALPVYEDIDKPLLQLLEDLLFNRDPEATEKLLVAAQEMKKDGKKADTKTDEWRSLT
VEERLKFALVKGVDQFVVADTEEARQNTAKYPRPLNVIERPLMDGMAVVGELFGAGKMFL
PQVIKSARVMKKAVAHLLPFMEIERQANIETMGLAEDESPYQGTVVIATVKGDVHDIGKN
IVSVVLGCNNFKVVDLGVMTPCENIIKAAIEEKADFIGLSGLITPSLDEMVYVAKEMNRV
GLNIPLLIGGATTSKTHTAVKISPRYPHPVVHCLDASKSVVVCSSLSDMSVRDAFLQDLN
EDYEDVRQEHYASLKDRRFTDLNKTREKKFKIDWDKFTAVKPSFVGRREYQNFDLNELIP
YIDWKPFFDVWQLRGKYPNRSYPKIFDDADVGAEAKKVFDDAQTWLKKLIDEKILVANAV
VSFLPAASEGDDMHVYDPETGNKLDTFYGLRQQSGREHDQPHFCLSDFIKPLKNGVPDDY
LGLFACTAGLGAEEYCKTLEKNHDDYASIMVKALADRLAEAYAEYLHKEVRTTLWGYSTN
EDLTESDLLSIKYQGIRPACGYPSQPDHTEKRTLWKLLEAEKNGIGLTEHLAMLPAASVS
GLYFANPQSEYFAVGKIDQDQVIDYAARKNVPKEEVERWLSPILGYDTD
NT seq 3750 nt   +upstreamnt  +downstreamnt
atgactcgaagtagtcttttcgaggagttggcggagatcgccaaagagcgtatcatgatc
atcgacggtgcaatgggaacaatgattcagagagagtatatggaagaggaagattttcgt
ggagagatcctcaaagaccacgacaagccactgaaaggaaacaatgatcttctatccatc
acccgcccagatatcatctacaaaatccacaagctctacttggaagccggagcagacttt
gtcgagactaacacattctcaggaaccacaattgcacaagcagattatcgatgtgaacat
ttggtgcatgaaatcaattatcagtcggcactcgtcgccagaagagcttgtgatgatgtt
ggagcagctactggtagacgtcgatatgtgtgcggagccattggacctacgaacagaact
ctctcaatttcgccatctgtggagaagccggattttcgtaacgttacattccaagagctc
gtgaaagcatacggagatcaagctcgctcacttattcaaggaggagtcgacgtgcttctc
gtggaaactgttttcgattcagccaacgccaaagctgctcttttcgcgattcgcacactt
ttcgaggatgaaggagttccagaaatgccagtttttctttctggaactattgttgatatg
tctggacgtacgctttctggtcaaactggtgaagctttccttgtgtccaccaagcaagga
aaaccaatggctgtaggattgaattgtgctcttggagccaaagatatgagacaatttgtg
gataatatgtcgaagtggtctgattctttcatcatctgttatccaaatgctggtcttccc
aatgcactcggaggctacgacgaaactcctgaagagatggctgatgttcttcgagaattc
gctagagacggacttgtgaatatcattggtggatgctgtggtactactccagatcacatt
aatgccatgtacaaggctgtgcaaggaatcacaccacgtgtcccaccacaagatcctcat
gctggaaaaatgctgctctctggacttgagccatctatcgtcgggcccgaaaccaatttt
gtgaacatcggggagcgctgtaacgtcgcaggatctcgtcgattctgtaaccttattaaa
aatgagaattacgatacggcgattgacgtggctcgtgtgcaagtcgacagtggagctcaa
attctagatgtgaatatggatgatggtcttcttgatggtccatatgcaatgtcaaagttc
cttcgtctcatatcctcggagccagatgtcgccaaaattccagtttgcattgattcttcg
gatttcgatgttattattgctggcctcgagtctactcaaggaaaatgtgtagtcaactcg
atttcgctgaaggaaggagaagaaaagttcaaggaacgtgctcgaatcatcaagcgatac
ggtgctgctgtggtcgtgatggcgttcgatgaacaagggcaagctgcggagacggatccg
aagttcgagatttgcgaaagatcctacagaattcttacggaagaggttggattcaatcca
aatgatatcatttttgacgccaacattctcactattgcaactggaatggaagagcattcg
aactatggaatgtattttattgaggcagctcgtatgataagagagaatctgccaggagct
catgtgtctggaggtgtatccaatatttcattctcattccgtggaatggaagcgattcgt
gaagctatgcattccgtgtttctgttctacgcaatcaaagctggaatggacatgggaatc
gtgaacgctggagctcttccagtttacgaggatattgataagccacttctgcaacttcta
gaagatcttcttttcaatcgggatccagaagcgaccgaaaagcttcttgtcgctgctcaa
gaaatgaagaaggacggaaagaaggctgacacgaagactgatgaatggagatcattgact
gtagaggaacgtctgaagtttgctctcgtgaagggagttgatcagtttgttgtcgctgat
accgaagaagctagacagaatactgcgaaatatccaagacctttgaacgttattgaacga
ccattgatggatggaatggcagtcgttggagagctgttcggagccggaaaaatgttcctc
ccacaagttatcaaatcagccagagttatgaagaaagcagttgctcatcttcttccattt
atggaaattgaacgacaagctaatattgagaccatggggctggctgaagatgaaagtcca
tatcagggtactgtagttattgctacagtcaaaggagatgttcatgacattggaaagaat
attgtgtctgttgtgttgggatgcaataatttcaaagttgtcgatcttggcgtcatgact
ccctgcgaaaacatcatcaaggctgcaattgaggagaaggctgactttatcggactctct
ggactcattacaccttctctcgatgaaatggtatatgttgccaaagagatgaacagagtt
ggattgaatattccattgctcattggcggagctacaacttccaaaacccatactgctgtc
aagatctctccaagatatcctcatccagttgtacattgtttggatgcttcaaagtctgtt
gtagtgtgctcttcgctgtctgatatgtctgttcgtgatgctttcttgcaagatttgaat
gaagattatgaagatgtgcgccaagaacattacgcttcactgaaagatcgccgcttcact
gatctcaataaaacccgcgagaagaaattcaagatcgactgggacaagtttacagccgtc
aagccttcctttgtcggacgccgtgaatatcaaaactttgatctcaacgaattgattccc
tacattgattggaagccgttcttcgatgtttggcaactgagaggaaaatacccgaatcgc
agttatccgaagatctttgatgacgcggatgttggtgctgaggccaagaaggttttcgat
gatgctcaaacatggctcaagaagcttatcgatgagaagattctcgtcgccaacgctgtt
gtttcattcctcccagctgcttctgaaggcgatgatatgcatgtctatgatccagagact
ggaaacaagctcgacacattctacggtcttcgccaacaatctggacgtgaacacgatcaa
ccacatttctgtctctcggatttcatcaagccactcaaaaatggcgtccctgatgattac
cttggtctattcgcttgtactgctggtctcggagccgaagaatactgtaaaactcttgaa
aagaatcatgatgattatgcttcaattatggtgaaagctcttgccgatcgtcttgccgaa
gcatacgctgaatacttgcacaaagaagtgagaacgactctttggggatattcaaccaac
gaagatctcaccgaatctgatcttttgtcgatcaaatatcaaggtattcgcccggcgtgt
ggctatccatctcaaccggatcacactgaaaagcgaactctttggaagctgcttgaggcg
gaaaagaatggaattgggctcacggagcatcttgctatgcttccagctgcatcagtgtct
ggactctatttcgcgaatccacagagtgaatatttcgctgttggaaagattgatcaagat
caggtaatcgattacgccgccagaaagaatgtgccaaaggaagaagttgagcgatggcta
tcaccaattcttggctatgatacggattaa

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