Caenorhabditis elegans (nematode): CELE_R03D7.1
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Entry
CELE_R03D7.1 CDS
T00019
Symbol
metr-1
Name
(RefSeq) putative methionine synthase
KO
K00548
5-methyltetrahydrofolate--homocysteine methyltransferase [EC:
2.1.1.13
]
Organism
cel
Caenorhabditis elegans (nematode)
Pathway
cel00270
Cysteine and methionine metabolism
cel00450
Selenocompound metabolism
cel00670
One carbon pool by folate
cel01100
Metabolic pathways
cel01230
Biosynthesis of amino acids
cel04980
Cobalamin transport and metabolism
cel04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
cel00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
CELE_R03D7.1 (metr-1)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
CELE_R03D7.1 (metr-1)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
CELE_R03D7.1 (metr-1)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
CELE_R03D7.1 (metr-1)
04980 Cobalamin transport and metabolism
CELE_R03D7.1 (metr-1)
Enzymes [BR:
cel01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.13 methionine synthase
CELE_R03D7.1 (metr-1)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Met_synt_B12
S-methyl_trans
Pterin_bind
B12-binding_2
B12-binding
DUF5817_CT
DUF5600
Motif
Other DBs
NCBI-GeneID:
174681
NCBI-ProteinID:
NP_496353
WormBase:
WBGene00010988
Ensembl:
WBGene00010988
UniProt:
Q09582
LinkDB
All DBs
Position
II:10926561..10931078
Genome browser
AA seq
1249 aa
AA seq
DB search
MTRSSLFEELAEIAKERIMIIDGAMGTMIQREYMEEEDFRGEILKDHDKPLKGNNDLLSI
TRPDIIYKIHKLYLEAGADFVETNTFSGTTIAQADYRCEHLVHEINYQSALVARRACDDV
GAATGRRRYVCGAIGPTNRTLSISPSVEKPDFRNVTFQELVKAYGDQARSLIQGGVDVLL
VETVFDSANAKAALFAIRTLFEDEGVPEMPVFLSGTIVDMSGRTLSGQTGEAFLVSTKQG
KPMAVGLNCALGAKDMRQFVDNMSKWSDSFIICYPNAGLPNALGGYDETPEEMADVLREF
ARDGLVNIIGGCCGTTPDHINAMYKAVQGITPRVPPQDPHAGKMLLSGLEPSIVGPETNF
VNIGERCNVAGSRRFCNLIKNENYDTAIDVARVQVDSGAQILDVNMDDGLLDGPYAMSKF
LRLISSEPDVAKIPVCIDSSDFDVIIAGLESTQGKCVVNSISLKEGEEKFKERARIIKRY
GAAVVVMAFDEQGQAAETDPKFEICERSYRILTEEVGFNPNDIIFDANILTIATGMEEHS
NYGMYFIEAARMIRENLPGAHVSGGVSNISFSFRGMEAIREAMHSVFLFYAIKAGMDMGI
VNAGALPVYEDIDKPLLQLLEDLLFNRDPEATEKLLVAAQEMKKDGKKADTKTDEWRSLT
VEERLKFALVKGVDQFVVADTEEARQNTAKYPRPLNVIERPLMDGMAVVGELFGAGKMFL
PQVIKSARVMKKAVAHLLPFMEIERQANIETMGLAEDESPYQGTVVIATVKGDVHDIGKN
IVSVVLGCNNFKVVDLGVMTPCENIIKAAIEEKADFIGLSGLITPSLDEMVYVAKEMNRV
GLNIPLLIGGATTSKTHTAVKISPRYPHPVVHCLDASKSVVVCSSLSDMSVRDAFLQDLN
EDYEDVRQEHYASLKDRRFTDLNKTREKKFKIDWDKFTAVKPSFVGRREYQNFDLNELIP
YIDWKPFFDVWQLRGKYPNRSYPKIFDDADVGAEAKKVFDDAQTWLKKLIDEKILVANAV
VSFLPAASEGDDMHVYDPETGNKLDTFYGLRQQSGREHDQPHFCLSDFIKPLKNGVPDDY
LGLFACTAGLGAEEYCKTLEKNHDDYASIMVKALADRLAEAYAEYLHKEVRTTLWGYSTN
EDLTESDLLSIKYQGIRPACGYPSQPDHTEKRTLWKLLEAEKNGIGLTEHLAMLPAASVS
GLYFANPQSEYFAVGKIDQDQVIDYAARKNVPKEEVERWLSPILGYDTD
NT seq
3750 nt
NT seq
+upstream
nt +downstream
nt
atgactcgaagtagtcttttcgaggagttggcggagatcgccaaagagcgtatcatgatc
atcgacggtgcaatgggaacaatgattcagagagagtatatggaagaggaagattttcgt
ggagagatcctcaaagaccacgacaagccactgaaaggaaacaatgatcttctatccatc
acccgcccagatatcatctacaaaatccacaagctctacttggaagccggagcagacttt
gtcgagactaacacattctcaggaaccacaattgcacaagcagattatcgatgtgaacat
ttggtgcatgaaatcaattatcagtcggcactcgtcgccagaagagcttgtgatgatgtt
ggagcagctactggtagacgtcgatatgtgtgcggagccattggacctacgaacagaact
ctctcaatttcgccatctgtggagaagccggattttcgtaacgttacattccaagagctc
gtgaaagcatacggagatcaagctcgctcacttattcaaggaggagtcgacgtgcttctc
gtggaaactgttttcgattcagccaacgccaaagctgctcttttcgcgattcgcacactt
ttcgaggatgaaggagttccagaaatgccagtttttctttctggaactattgttgatatg
tctggacgtacgctttctggtcaaactggtgaagctttccttgtgtccaccaagcaagga
aaaccaatggctgtaggattgaattgtgctcttggagccaaagatatgagacaatttgtg
gataatatgtcgaagtggtctgattctttcatcatctgttatccaaatgctggtcttccc
aatgcactcggaggctacgacgaaactcctgaagagatggctgatgttcttcgagaattc
gctagagacggacttgtgaatatcattggtggatgctgtggtactactccagatcacatt
aatgccatgtacaaggctgtgcaaggaatcacaccacgtgtcccaccacaagatcctcat
gctggaaaaatgctgctctctggacttgagccatctatcgtcgggcccgaaaccaatttt
gtgaacatcggggagcgctgtaacgtcgcaggatctcgtcgattctgtaaccttattaaa
aatgagaattacgatacggcgattgacgtggctcgtgtgcaagtcgacagtggagctcaa
attctagatgtgaatatggatgatggtcttcttgatggtccatatgcaatgtcaaagttc
cttcgtctcatatcctcggagccagatgtcgccaaaattccagtttgcattgattcttcg
gatttcgatgttattattgctggcctcgagtctactcaaggaaaatgtgtagtcaactcg
atttcgctgaaggaaggagaagaaaagttcaaggaacgtgctcgaatcatcaagcgatac
ggtgctgctgtggtcgtgatggcgttcgatgaacaagggcaagctgcggagacggatccg
aagttcgagatttgcgaaagatcctacagaattcttacggaagaggttggattcaatcca
aatgatatcatttttgacgccaacattctcactattgcaactggaatggaagagcattcg
aactatggaatgtattttattgaggcagctcgtatgataagagagaatctgccaggagct
catgtgtctggaggtgtatccaatatttcattctcattccgtggaatggaagcgattcgt
gaagctatgcattccgtgtttctgttctacgcaatcaaagctggaatggacatgggaatc
gtgaacgctggagctcttccagtttacgaggatattgataagccacttctgcaacttcta
gaagatcttcttttcaatcgggatccagaagcgaccgaaaagcttcttgtcgctgctcaa
gaaatgaagaaggacggaaagaaggctgacacgaagactgatgaatggagatcattgact
gtagaggaacgtctgaagtttgctctcgtgaagggagttgatcagtttgttgtcgctgat
accgaagaagctagacagaatactgcgaaatatccaagacctttgaacgttattgaacga
ccattgatggatggaatggcagtcgttggagagctgttcggagccggaaaaatgttcctc
ccacaagttatcaaatcagccagagttatgaagaaagcagttgctcatcttcttccattt
atggaaattgaacgacaagctaatattgagaccatggggctggctgaagatgaaagtcca
tatcagggtactgtagttattgctacagtcaaaggagatgttcatgacattggaaagaat
attgtgtctgttgtgttgggatgcaataatttcaaagttgtcgatcttggcgtcatgact
ccctgcgaaaacatcatcaaggctgcaattgaggagaaggctgactttatcggactctct
ggactcattacaccttctctcgatgaaatggtatatgttgccaaagagatgaacagagtt
ggattgaatattccattgctcattggcggagctacaacttccaaaacccatactgctgtc
aagatctctccaagatatcctcatccagttgtacattgtttggatgcttcaaagtctgtt
gtagtgtgctcttcgctgtctgatatgtctgttcgtgatgctttcttgcaagatttgaat
gaagattatgaagatgtgcgccaagaacattacgcttcactgaaagatcgccgcttcact
gatctcaataaaacccgcgagaagaaattcaagatcgactgggacaagtttacagccgtc
aagccttcctttgtcggacgccgtgaatatcaaaactttgatctcaacgaattgattccc
tacattgattggaagccgttcttcgatgtttggcaactgagaggaaaatacccgaatcgc
agttatccgaagatctttgatgacgcggatgttggtgctgaggccaagaaggttttcgat
gatgctcaaacatggctcaagaagcttatcgatgagaagattctcgtcgccaacgctgtt
gtttcattcctcccagctgcttctgaaggcgatgatatgcatgtctatgatccagagact
ggaaacaagctcgacacattctacggtcttcgccaacaatctggacgtgaacacgatcaa
ccacatttctgtctctcggatttcatcaagccactcaaaaatggcgtccctgatgattac
cttggtctattcgcttgtactgctggtctcggagccgaagaatactgtaaaactcttgaa
aagaatcatgatgattatgcttcaattatggtgaaagctcttgccgatcgtcttgccgaa
gcatacgctgaatacttgcacaaagaagtgagaacgactctttggggatattcaaccaac
gaagatctcaccgaatctgatcttttgtcgatcaaatatcaaggtattcgcccggcgtgt
ggctatccatctcaaccggatcacactgaaaagcgaactctttggaagctgcttgaggcg
gaaaagaatggaattgggctcacggagcatcttgctatgcttccagctgcatcagtgtct
ggactctatttcgcgaatccacagagtgaatatttcgctgttggaaagattgatcaagat
caggtaatcgattacgccgccagaaagaatgtgccaaaggaagaagttgagcgatggcta
tcaccaattcttggctatgatacggattaa
DBGET
integrated database retrieval system