Caenorhabditis elegans (nematode): CELE_Y110A7A.19
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Entry
CELE_Y110A7A.19 CDS
T00019
Symbol
let-630
Name
(RefSeq) Small ribosomal subunit protein mS39
KO
K17659
pentatricopeptide repeat domain-containing protein 3
Organism
cel
Caenorhabditis elegans (nematode)
Brite
KEGG Orthology (KO) [BR:
cel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
cel03029
]
CELE_Y110A7A.19 (let-630)
Mitochondrial biogenesis [BR:
cel03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
CELE_Y110A7A.19 (let-630)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rib_mS39_PPR
PPR_3
PPR_2
PPR_1
Motif
Other DBs
NCBI-GeneID:
172153
NCBI-ProteinID:
NP_491536
WormBase:
WBGene00002804
Ensembl:
WBGene00002804
UniProt:
Q9N584
LinkDB
All DBs
Position
I:complement(5162602..5164884)
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AA seq
664 aa
AA seq
DB search
MIGRMGLGRVITRSLSSVEPALSQKLTIQPAIERSPTDLLNALSETVGPDTTAPHFAYID
DPITIPSTQSTKKTYFMAKEFGKRAARELATEWPTLFAFDRDQPQLPVFRPRHLADPLQV
EPTENNLLKMISSREVKDSCILYERMRSENVDVSEKVQLELFRLVTYYNSSNVPFAEWEE
FVGMRNFGEDSTSSWKSGAVADLLFETLPKTDETVSIMIAGLCKFSDHSSLERARELYKE
HRAAKGKVYREAFNGLIGASSYSVGKKLVAEMISLRMTPDIFTFNALLSSAAKAGKFEDR
VKAFTEIIGEMKEIGVEPALSSFHLIIKNIIDFKLLDNEKRESDEQKKTYNHQLTVAISW
LNEIQNSLTGKTLKPITSTCNLFFVEAMGIHYRAANENLAENLVSIYESKANEVKMPAFT
IESMFYNRQLQLAVEQSASLNRIYDLYTTMVPRLVGVNNYLSSLVFRKLAASSDRHWPLL
RRVIIDGIAAGQMNGVIGEEMRKQLCNVQLHTLGTSEREQFTSLVQKLVAVWVEFSQFTE
ERMRRLQRKLSPSQISECALLLTRIGEQQKAYELLDLLLDETASSGDEATVYPRGHARPW
AMAELFEDALRKRDTYAAATCLQIMSLTANRAKLEPLANRIFEKCNVNQEQVRIIQGFIR
LRPQ
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atgatcggccgcatgggacttggcagagttataactcgcagtttatcgtcggttgagcct
gcattatctcaaaaattgacaatacagccagcaatcgagagatctccaacagatttgtta
aatgccttgtcagaaaccgttggcccggacacaactgctccacattttgcctacattgac
gatccaattaccattccttccacgcagtcaacgaaaaagacctattttatggcgaaggag
tttggcaaaagagctgcacgagaactagctacagaatggccaaccctcttcgcttttgac
agagatcaacctcagctcccggttttccgtcctcgacatctagcagatccccttcaagtt
gaaccgacagagaataacctgcttaaaatgatttcaagtcgagaagtaaaagactcgtgt
attttgtatgaacgcatgcgatcagagaacgttgacgttagcgagaaagtccagctggaa
ctattccgtcttgtaacctattacaattcgtcaaacgtacctttcgcagaatgggaggag
tttgttggaatgcgcaattttggagaagattctacatcctcatggaaatcgggtgcagtc
gctgatcttcttttcgaaactctcccaaaaactgatgaaaccgtttctataatgattgct
ggtctatgcaagttttctgatcattctagtttggaaagagctagagaattgtacaaggag
catcgagctgcaaaaggaaaagtttaccgagaagcgttcaatggattaattggcgcttca
agctacagtgtcgggaagaaattggtagctgaaatgatttccctcagaatgacacccgat
attttcacgttcaatgcattactgtcgtctgctgcaaaagctggaaagtttgaagatcgt
gtgaaggcgttcactgaaattattggagaaatgaaagagattggagttgaaccagcactg
tcatcttttcatttaattatcaaaaacatcatagattttaaattattggataatgaaaaa
cgagagagtgacgagcaaaagaagacctataatcaccagctcaccgtggctatatcttgg
ctcaatgaaattcagaatagccttactggaaaaactctcaagccgattacatccacttgt
aatcttttcttcgtcgaagcaatgggaatccattacagagctgcaaatgagaacctcgca
gaaaatcttgtttcaatttatgaatccaaagcaaacgaagtaaagatgccagcattcaca
attgaatcaatgttctataatagacaattacaattggctgtggaacaaagtgcttcactg
aacagaatttatgatttgtacaccaccatggtaccacgacttgttggagtcaacaattat
ctgtcatcactagtttttcgaaaactcgctgcatcctccgatcgtcattggccactgtta
cggagagtaatcatcgacggtattgcagctggacagatgaatggagttattggagaagaa
atgcgcaaacagttgtgtaatgtacaactacatacattgggaactagtgaacgggagcaa
ttcacatctcttgtccaaaaattggttgcagtttgggttgagttcagccaattcacagaa
gagagaatgagaaggctccaaaggaaactgtcgcctagccagatctcagaatgtgctttg
ctcttgaccagaatcggagaacagcagaaagcttacgaactgttagatctactgcttgat
gaaactgcaagcagtggggacgaagcgactgtttatccacgtggacatgctaggccatgg
gcaatggcagaattgttcgaagatgctcttagaaaacgtgatacatatgctgcagcgact
tgcctgcaaattatgtcgttgaccgccaaccgtgcaaaacttgagcctctcgccaatcgc
attttcgagaaatgtaatgtgaatcaagagcaagttcgaattattcaaggattcattcgt
cttcgcccacaataa
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