Caenorhabditis elegans (nematode): CELE_ZK328.2
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Entry
CELE_ZK328.2 CDS
T00019
Symbol
eftu-2
Name
(RefSeq) Tr-type G domain-containing protein
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
cel
Caenorhabditis elegans (nematode)
Pathway
cel03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cel00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CELE_ZK328.2 (eftu-2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cel03041
]
CELE_ZK328.2 (eftu-2)
Spliceosome [BR:
cel03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
CELE_ZK328.2 (eftu-2)
Complex C
U5 SnRNP specific factors
CELE_ZK328.2 (eftu-2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFL1
EFG_III
Septin
MMR_HSR1
EF-G_D2
SRPRB
Ras
Roc
TniB
Motif
Other DBs
NCBI-GeneID:
175851
NCBI-ProteinID:
NP_498308
WormBase:
WBGene00001166
Ensembl:
WBGene00001166
UniProt:
Q23463
Structure
PDB
PDBj
LinkDB
All DBs
Position
III:6009560..6012840
Genome browser
AA seq
974 aa
AA seq
DB search
MDSDLYDEFGNYIGPELDSDDDAGDIDDNGDDEDRSDVDEDDEPDRMEEDDAEEIPQNQV
VLHEDKKYYATALEVYGEGVETLVQEEDAQPLTEPIVKPVSKKKFQAAERFLPETVYKKE
YLADLMDCPHIMRNVAIAGHLHHGKTTFLDCLMEQTHPEFYRAEDADARFTDILFIEKQR
GCSIKSQPVSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVMVDAHEGVMM
NTERAIRHAIQERLAVTLCISKIDRLLLELKLPPADAYFKLRLIIDQVNNILSTFAEEDV
PVLSPLNGNVIFSSGRYNVCFSLLSFSNIYAKQHGDSFNSKEFARRLWGDIYFEKKTRKF
VKKSPSHDAPRTFVQFILEPMYKIFSQVVGDVDTCLPDVMAELGIRLSKEEQKMNVRPLI
ALICKRFFGDFSAFVDLVVQNIKSPLENAKTKIEQTYLGPADSQLAQEMQKCNAEGPLMV
HTTKNYPVDDATQFHVFGRVMSGTLEANTDVRVLGENYSIQDEEDCRRMTVGRLFVRVAS
YQIEVSRVPAGCWVLIEGIDQPIVKTATIAELGYEEDVYIFRPLKFNTRSCVKLAVEPIN
PSELPKMLDGLRKVNKSYPLLTTRVEESGEHVLLGTGEFYMDCVMHDMRKVFSEIDIKVA
DPVVTFNETVIETSTLKCFAETPNKKNKITMMAEPLEKQLDEDIENEVVQIGWNRRRLGE
FFQTKYNWDLLAARSIWAFGPDTTGPNILLDDTLPSEVDKHLLSTVRESLVQGFQWATRE
GPLCEEPIRQVKFKLLDAAIATEPLYRGGGQMIPTARRCAYSAFLMATPRLMEPYYTVEV
VAPADCVAAVYTVLAKRRGHVTTDAPMPGSPMYTISAYIPVMDSFGFETDLRIHTQGQAF
CMSAFHHWQLVPGDPLDKSIVIKTLDVQPTPHLAREFMIKTRRRKGLSEDVSVNKFFDDP
MLLELAKQQDYTGF
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
atggattcggatctctacgatgagtttggtaactatatcggtccagagctagactctgac
gatgatgccggagatattgatgacaatggtgatgatgaagatcgtagcgatgtggatgag
gatgatgaaccagacagaatggaagaagatgacgcagaagaaattccccagaatcaagtt
gttcttcatgaagataaaaagtactatgctacagctctcgaagtatacggggaaggtgta
gaaaccttggtccaagaggaagacgctcagccactcactgaaccaattgtcaaaccagta
tccaagaagaagtttcaagccgctgagcgttttctcccggaaactgtctacaagaaagaa
tatttagctgatttaatggactgccctcatatcatgagaaatgttgcaatcgctggtcat
cttcatcacggaaagacgactttcttggattgtcttatggaacaaactcatccagagttc
tacagagctgaagacgcagatgctcgatttactgatatcttgttcattgagaagcagaga
ggatgctcgattaaatctcagccagtgagcattgtggctcaggatagtcgaagcaaaagc
tatttgctcaatataattgatactccaggtcacgtgaacttttcggacgaaatgactgct
tcataccgtcttgctgatggagttgttgtgatggttgatgctcatgaaggtgttatgatg
aacactgaacgagcaattcgccacgcgattcaagagaggcttgcagtaacattgtgcatt
tcgaagatcgaccgcttgcttcttgagttgaagcttccaccagcagatgcttacttcaaa
ctccgtcttatcattgatcaagtcaataatatattgagcacttttgccgaagaagacgtt
ccagtactctctccacttaacggcaacgttattttttcatcgggacgatacaatgtctgc
ttttctctattgtctttttcgaatatctatgcgaaacaacatggtgactccttcaactca
aaggagtttgctcgccgtctctggggagatatttacttcgagaagaaaactcgcaaattc
gtaaagaagtcgccgtcccatgatgctccacgtacatttgtgcagttcattctcgagcca
atgtacaagatcttttcgcaagtcgtcggagatgtcgatacttgccttcctgatgtgatg
gctgagttgggaattcgtttgtcaaaagaagaacagaaaatgaatgtccgtccattgatt
gctctcatctgtaaacgcttctttggagatttcagtgcatttgttgatttggtggttcaa
aatatcaaatcaccacttgaaaatgcgaaaactaaaatcgagcagacatatcttggacca
gctgattcccaattggctcaagaaatgcagaaatgtaatgctgaaggaccattgatggtt
catacaacaaagaattatcccgtagatgatgcaactcagttccatgtatttggacgtgtt
atgagcggaacattggaagcaaatacagacgtccgtgtacttggagagaactacagtatt
caagatgaagaagattgccgaagaatgacagttggaagactatttgtgcgtgttgccagt
tatcagattgaagtttctcgtgttcctgcaggttgctgggtacttattgaaggaattgat
cagccaattgttaaaactgcaaccattgctgagttgggatacgaggaagatgtctacatt
ttccgtcctctcaaattcaacactcgcagttgcgtgaaacttgccgtagagccgattaat
ccatccgaactcccgaaaatgttggatggcttgagaaaagtcaacaagtcatatccgttg
ctgacgactagagttgaagaatccggagagcacgtgttgctcggaactggagaattttat
atggactgtgtgatgcacgacatgcgaaaggtgttctcagagattgatatcaaagttgct
gatccagttgtcacattcaacgagactgtcatcgaaacgagtacgctgaaatgttttgca
gagactcccaacaaaaaaaataaaatcacaatgatggctgaacctctagaaaaacagttg
gatgaggacatcgaaaatgaagttgttcaaatcggatggaatagacggcgtcttggagag
ttcttccagaccaagtacaactgggatcttttggcagctcgttcaatttgggcatttggc
cctgatactacaggacccaacattcttctagatgacacattgccatcggaagttgacaaa
cacttgctatcaactgtcagagaatctcttgttcaaggattccaatgggcaaccagagaa
ggcccattgtgtgaggaaccaattcgtcaagtgaagttcaaacttctcgatgccgcaatc
gccacagaaccactttatcgaggtggaggtcagatgatcccaactgcacgccgatgtgcc
tattctgcattccttatggccacgccaagattaatggagccatactatacagtggaagtt
gttgcaccagctgattgtgtagctgctgtatatacagtgttagctaaacgacgtggtcac
gtcaccactgatgcaccaatgccaggatcacctatgtacactatcagcgcgtacattcca
gtaatggactcgttcggattcgaaactgatcttcgaattcacacacagggacaagcattc
tgtatgtctgctttccatcattggcaactcgtaccaggagatccactcgataaatccatt
gttatcaagactctcgacgtccagccaactccacatctcgccagagagttcatgatcaag
accagaagacgcaagggtttgtctgaagatgtctccgttaacaagttcttcgatgatccg
atgcttctcgaacttgcaaagcagcaagattatactggattctaa
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