Cellulomonas sp. ES6: P9841_05075
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Entry
P9841_05075 CDS
T10432
Symbol
ligA
Name
(GenBank) NAD-dependent DNA ligase LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
cele Cellulomonas sp. ES6
Pathway
cele03030
DNA replication
cele03410
Base excision repair
cele03420
Nucleotide excision repair
cele03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cele00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
P9841_05075 (ligA)
03410 Base excision repair
P9841_05075 (ligA)
03420 Nucleotide excision repair
P9841_05075 (ligA)
03430 Mismatch repair
P9841_05075 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cele03032
]
P9841_05075 (ligA)
03400 DNA repair and recombination proteins [BR:
cele03400
]
P9841_05075 (ligA)
Enzymes [BR:
cele01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
P9841_05075 (ligA)
DNA replication proteins [BR:
cele03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
P9841_05075 (ligA)
DNA repair and recombination proteins [BR:
cele03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
P9841_05075 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
P9841_05075 (ligA)
MMR (mismatch excision repair)
DNA ligase
P9841_05075 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
P9841_05075 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
OB_DNA_ligase
HHH_2
BRCT
DNA_ligase_ZBD
HHH_5
PTCB-BRCT
HHH
Nlig-Ia
SctB2
zf-IS66
Motif
Other DBs
NCBI-ProteinID:
WHP19388
LinkDB
All DBs
Position
complement(1066506..1068917)
Genome browser
AA seq
803 aa
AA seq
DB search
MDEPAARRLWSELADRVRDLQFAYYVRDEPLASDAEYDATLRRLEALEDAYQGLGLRTPD
SPTQRVGGTFSTDFRAVDHVERMLSLDNAFSAEDVAAWAERVHRDLEIPADAGLQYLTEL
KIDGLAIALLYERAGDGPARLVRAATRGDGRTGEDVTLNVRTIAAIPETLAGDPATHPEQ
IEVRGEVFLPVEAFERLNAAQVAAGRSPFANPRNAAAGSLRQKDPRVTASRPLQVYAHGI
GALRWGTGRGAGLERQSQVYDLLAGWGVPVSPHSRVVAGLAGVQEMIDHYGEHRHEVEHE
IDGIVIKVDELALQRRLGATSRAPRWAIAYKYPPEEVNTRLLAIEVNVGRTGRVTPYAVM
EPVRVSGSTVAMATLHNKDVVAAKGVRPGDVVVLRKAGDVIPEIVGPVTALADDGYPRTD
WTMPTRCPECGSLLRPMREGDVDLRCPNARTCPAQVRGRVEHIGSRGALDIEALGEVTAA
ALTQPEVPSPPPVVNEADLFDLVAWSADATEAERERVRERSFALLKQVEVVVRDPDSGEP
RVDDDGVVRRRTPFRRRVTHSARARREAEARGEVLPEHEDVPSEQAKKLLDELDAAKTKP
FWRVLVGLSIRNVGPTAARAIAQRFGSMAALEEALADAEQARETLSAVEGVGPTIADSIV
DWFAEDWHAEIVRRWRAAGVVMADEADASVPRTLEGLTVVVTGSLEGFSRDQAKEAVLSR
GGKASGSVSKKTDFVVVGDNAGSKEAKARELGLRILDEAGFVTLLAEGPAGLPGADDADG
SGGADAPPGAEPPGTPADASDDA
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
ctggacgagccggcggcccgccgcctctggtccgagctggccgaccgggtccgcgacctg
cagttcgcctactacgtgcgcgacgagcccctggccagcgacgcggagtacgacgcgacc
ctgcggcgcctcgaggcgctcgaggacgcctaccaggggctcgggctgcgcacgccggac
tccccgacgcagcgcgtcgggggcaccttctcgacggacttccgggcggtcgaccacgtc
gagcggatgctgtcgctcgacaacgcgttctctgcggaggacgtcgcggcgtgggccgag
cgcgtgcaccgcgacctcgagatcccggcggacgcggggctgcagtacctgacggagctc
aagatcgacggcctcgcgatcgcgctgctctacgagcgggccggcgacggcccggcccgg
ctcgtgcgggcggcgacgcgcggcgacgggcgcaccggtgaggacgtcacgctcaacgtc
cgcaccatcgccgcgatcccggagaccctcgcgggcgaccccgccacgcaccccgagcag
atcgaggtgcgcggcgaggtgttcctgcccgtcgaggcgttcgagcggctgaatgcggcg
caggtcgcggccggccgctccccgttcgcgaacccccgcaacgccgccgcggggtcgttg
cgccagaaggacccccgggtgacggcgtcccggccgctgcaggtgtacgcgcacggcatc
ggcgccctgcggtgggggacgggcaggggtgcgggcctcgagcggcagtcgcaggtgtac
gacctgctggcggggtggggcgtcccggtgtcgccgcacagccgggtggtcgcgggcctg
gccggcgtgcaggagatgatcgaccactacggcgagcaccggcacgaggtcgagcacgag
atcgacggcatcgtcatcaaggtcgacgagctcgcgctccagcgccggctgggcgcgacc
agccgtgccccgcgctgggcgatcgcctacaagtacccgccggaggaggtcaacacccgc
ctgctcgcgatcgaggtgaacgtcggccgcaccggccgcgtcacgccctacgcggtgatg
gagccggtccgcgtgtccggctcgacggtcgcgatggcgacgcttcacaacaaggacgtc
gtcgccgcgaagggcgtccggcccggggacgtggtcgtgctgcgcaaggccggcgacgtc
atccccgagatcgtcgggccggtgaccgcgctcgcggacgacgggtacccgcggaccgac
tggacgatgccgacgcggtgccccgagtgcggctccctcctgcgtccgatgcgggagggg
gacgtcgacctgcgctgcccgaacgcccgcacctgcccggcgcaggtacgcggccgcgtc
gagcacatcggctcgcgcggcgccctcgacatcgaggcgctcggcgaggtcaccgcggcc
gccctcacgcagcccgaggtcccctcgccgccgccggtcgtgaacgaggcggacctcttc
gacctcgtggcctggtccgccgacgccacggaggccgagcgcgaacgggtgcgcgagcgc
agcttcgccctgttgaagcaggtcgaggtggtcgtgcgcgaccccgactccggcgagccg
cgggtcgacgacgacggcgtcgtgcgtcgacgcaccccgttccggcgccgggtgacgcac
agcgcgcgggcccggcgcgaggccgaggcgcgcggggaggtgctgccggagcacgaggac
gtgccgtccgagcaggccaagaagctcctggacgagctggacgccgccaagaccaagccg
ttctggcgcgtgctcgtcgggctgagcatccgcaacgtcggtccgacggctgcgcgcgcg
atcgcgcagcggttcgggtcgatggccgcgctcgaggaggcgctcgccgacgccgagcag
gcgcgcgagacgctgtcggcggtcgagggcgtcggcccgaccatcgcggactcgatcgtc
gactggttcgccgaggactggcacgccgagatcgtgcggcggtggcgggcggccggtgtc
gtcatggccgacgaggcggacgcgtcggtcccgcgcaccctcgaggggctcacggtcgtc
gtcacgggcagcctcgaggggttcagccgggaccaggcgaaggaggccgtgctcagccgc
ggcggcaaggcgtcgggcagcgtctccaagaagacggacttcgtcgtcgtgggggacaac
gcggggtcgaaggaggcgaaggcgcgcgagctcggtctgcgcatcctcgacgaggccggt
ttcgtcacgctgctggccgagggacccgcgggcctgccgggcgccgacgacgccgacggc
tctggcggcgccgacgcgcccccgggagcggaacccccggggaccccggcggacgcgtcg
gacgacgcgtga
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