Cedecea neteri ND14a: LH86_11935
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Entry
LH86_11935 CDS
T03337
Symbol
rumB
Name
(GenBank) 23S rRNA methyltransferase
KO
K03212
23S rRNA (uracil747-C5)-methyltransferase [EC:
2.1.1.189
]
Organism
cen
Cedecea neteri ND14a
Brite
KEGG Orthology (KO) [BR:
cen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cen03009
]
LH86_11935 (rumB)
Enzymes [BR:
cen01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.189 23S rRNA (uracil747-C5)-methyltransferase
LH86_11935 (rumB)
Ribosome biogenesis [BR:
cen03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
LH86_11935 (rumB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
MTS
Methyltransf_25
Cons_hypoth95
Methyltransf_4
Methyltransf_12
Methyltransf_15
Methyltransf_32
Methyltransf_11
TehB
Motif
Other DBs
NCBI-ProteinID:
AIR65768
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All DBs
Position
2494625..2495761
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AA seq
378 aa
AA seq
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MQCALYDAGRCRSCQWIEQPVDDQLLAKMTDLRQLLEGIAVGEWCQPVSGPEQAFRNKAK
MVVSGSVEKPLLGMLHRDGTPEDLTDCPLYPASFEPVFAALKPFIARAGLTPYNVARKRG
ELKYLLLTESLADGGMMLRFVLRSESKLEQLKAALPWLQQQLPQLKVISANIQPVHMAIM
EGEREIPLTEQRALKEVFNGVPLYIRPQSFFQTNPQVASRLYATARDWVRALPVKHMWDL
FCGVGGFGLHCTTPEMKLTGIEIAPEAIASAKQSADKLGLNNIHFQALDSTQFAVAQQDI
PQLVLVNPPRRGIGKALCDYLTQMAPAFIVYSSCNAQTMAKDIQMLPGYRVVRTQLFDMF
PHTSHYEVLTLLERCPSP
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgcaatgcgcgctctatgatgccggccgctgtcgttcctgccagtggattgaacaaccg
gtggatgaccagcttctcgctaaaatgaccgatctccggcagctgctggaaggcattgcg
gtgggcgagtggtgccagccggtaagcggccctgagcaggcatttcgcaacaaagccaaa
atggtggtcagcggcagcgtggaaaaaccgctgctggggatgctgcaccgcgacggcacg
cccgaagatttaaccgactgccctttgtaccctgcttcatttgagcctgtttttgcggcg
ctgaagccctttattgcccgtgcggggttaacgccttacaacgtggcgcgtaagcgtggg
gagctgaagtatctgctgctgaccgaaagcctggcggatggcggcatgatgctgcgcttt
gtgctgcgttcggaaagcaagctggagcagttgaaagcggcgctgccgtggctacagcag
cagcttcctcagctcaaagtaatttcagccaatatccagcccgtacacatggcgataatg
gaaggtgaacgggaaattccgctgaccgaacagcgtgcgctcaaagaggttttcaacggc
gtgccgctctatattcgtccgcaaagcttcttccagactaaccctcaggttgcttcccgt
ctgtacgccaccgctcgtgactgggtgcgtgcgctacccgtcaaacatatgtgggatctg
ttctgcggcgtgggaggatttggcctgcactgcaccacgccggagatgaagcttaccggg
attgaaattgcccccgaggcgattgccagcgcaaagcagtcggctgataaactgggcctg
aataatattcattttcaggcgctggattccacgcagtttgccgtcgctcagcaggatatc
ccgcagctggtgctggtgaacccgccacgccgggggataggcaaagcgctgtgcgattat
ctgacgcagatggccccggcgtttattgtctattcaagctgcaacgcgcagaccatggca
aaggatattcagatgctgccgggttatcgcgtggtgcgaacccagctgtttgatatgttc
ccgcatacttcgcattacgaagtgttgacgttgctggagcgttgtccctcaccctaa
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