Coxiella endosymbiont of Amblyomma nuttalli: CEAn_00356
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Entry
CEAn_00356 CDS
T07596
Name
(GenBank) DNA ligase
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
ceno
Coxiella endosymbiont of Amblyomma nuttalli
Pathway
ceno03030
DNA replication
ceno03410
Base excision repair
ceno03420
Nucleotide excision repair
ceno03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ceno00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CEAn_00356
03410 Base excision repair
CEAn_00356
03420 Nucleotide excision repair
CEAn_00356
03430 Mismatch repair
CEAn_00356
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ceno03032
]
CEAn_00356
03400 DNA repair and recombination proteins [BR:
ceno03400
]
CEAn_00356
Enzymes [BR:
ceno01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
CEAn_00356
DNA replication proteins [BR:
ceno03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
CEAn_00356
DNA repair and recombination proteins [BR:
ceno03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
CEAn_00356
NER (nucleotide excision repair)
GGR (global genome repair) factors
CEAn_00356
MMR (mismatch excision repair)
DNA ligase
CEAn_00356
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
CEAn_00356
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
HHH_5
Nlig-Ia
DNA_ligase_ZBD
HHH
PTCB-BRCT
5_3_exonuc
HHH_3
RNA_ligase
BRCT_2
UPF0758_N
Motif
Other DBs
NCBI-ProteinID:
QTS83878
LinkDB
All DBs
Position
457296..459323
Genome browser
AA seq
675 aa
AA seq
DB search
MKVMIPPEIYAKINRLRKEINEHDYRYYVLSRPTIPDMIYDQLFRELQELEEKYPGSIIS
TSPTQRVGARPLTIFEQSQHKIPMLSLNNVFNAAELRMFDERIRQWLKTASSLEYICEPK
LDGVALSLFYENGALIRAATRGDGFIGENVTQNARTISTIPLQLRGSNYPNQVEIRGEVL
MSREGFATFNQEAKKRGDKTFVNARNAASGSLRQLDPRITARRSLIFFGYHLGILKDNRK
LPGRHSDVLMCCKEWGIPIASEIKVVEGINGCLRYYEYLVKIREKLRFDIDGIVLKVNSL
ALQEKLGVVSCAPRWAIAYKFPAQEKMTLLKAIEFQVGRTGAVTPVARLKPVFIGGVTIS
NSTLHNFDELKKKDVRIGDTVIVRRAGDVIPEVVGPILSKRPKNAKIVEVPSYCLICHAE
VIKPDNEAIARCMGGLYCRAQLHETIKHFASRRAMDIKGLGDKLVELFLQKKLIEDITTV
YQLKQSTIAALPYMGEKSAANLLKAIERSKKTTFSRFLYALGIRNVGETTARILVRRFHK
LESLMQASIEDLQAIRDIGPTTAKNIEVFFRQKHNIELINKLMQLGIYWPEERITTQSSI
FGKTFVLTGSLKSLTRHDAKEKLERFGGKVSSIVSKNTDYIVIGKNPGSKYSDAKELGIP
MLDEEAFLDVFENEY
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtgatgattccgccagagatttatgcaaaaattaaccgattgcgaaaagaaatt
aacgagcacgattatcgctattacgttttgtcgcgtccaactattccagatatgatttat
gatcagctttttcgcgaacttcaagaactagaagaaaaatatccaggatctattatttca
acttctccaacccagagggttggagctagaccgctcaccatctttgagcagtcccagcat
aaaattccaatgctgtcattaaataatgtatttaatgcagcagaattacgcatgttcgat
gaacgtattcgacaatggttaaaaactgcaagctccctggaatatatatgtgaacctaag
ctagatggggtagcgttaagtttattctatgaaaatggtgcgttgattcgtgccgctact
cggggcgatggtttcattggtgagaatgtgacgcaaaatgccagaactatttccactatt
cctttacaattgcgtggcagcaactatccaaatcaggttgagatacgtggtgaagtatta
atgtctcgggaaggtttcgcgacatttaatcaagaagctaaaaagcgcggagataaaaca
tttgttaacgctcgaaatgctgcttctggtagtttacgccaattagaccctcggattact
gccagacgatcgctgattttttttggatatcacttaggtattttaaaagataatagaaag
ctacctggaaggcatagtgatgtgttgatgtgctgtaaagaatggggtattccaattgcc
tctgaaataaaagtagttgaggggatcaatggttgtcttcgctattatgaatatttggta
aaaattcgtgagaaactacgatttgatatagatggtattgtcttaaaagtaaactcttta
gcattgcaagaaaaattaggtgttgtttcatgcgcaccgcgatgggctatcgcttataaa
tttcctgctcaagaaaaaatgacgttgttaaaagcaatcgagtttcaggtagggcgtact
ggtgctgttacaccagtggctcgtttaaaaccagttttcattgggggagtaacgataagt
aatagtactttgcataattttgacgaattgaaaaaaaaagacgtccgaatcggtgacact
gttattgttcgtcgagcaggtgacgttattcccgaagtagtggggcctattttatctaag
cgtcctaagaatgctaaaatagttgaagtaccatcgtattgcttaatctgtcatgcagaa
gttattaagcctgacaatgaagctatagcacgatgcatgggggggttatattgtcgtgct
caattacacgaaacaattaaacacttcgcttcacgtcgagcaatggatattaagggatta
ggtgataaattagttgaattatttctacagaaaaaattaattgaagatattactactgtt
tatcaattgaaacagtcgacgattgctgcattaccgtacatgggtgaaaaatcagctgct
aatctcctaaaagcaattgaacgtagtaaaaaaacaacattctctcgatttttatatgct
ctaggtattcgcaatgtgggagaaactaccgcacgtatattggttcgtcgttttcacaaa
cttgaatctttaatgcaagcctctatagaagatttacaagctattcgagacatcggaccc
acgacagctaaaaatattgaagtattttttcgtcaaaaacataatattgagttaattaat
aagttaatgcagttaggtatctactggccagaagagcgaataactacacaatctagtatt
tttggaaaaactttcgttttaactggtagtttaaaatccttaactcgacatgatgcaaaa
gaaaaacttgaacgttttggtggaaaggttagcagcattgtttcaaaaaataccgattat
atagtgattggtaaaaatcctggtagtaaatacagtgatgcgaaagaattgggtattcct
atgcttgatgaggaggcttttctcgatgtattcgaaaacgaatattga
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