Comamonas endophytica: M9799_16280
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Entry
M9799_16280 CDS
T09983
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
cenp
Comamonas endophytica
Pathway
cenp01501
beta-Lactam resistance
cenp01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
cenp00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
M9799_16280
01503 Cationic antimicrobial peptide (CAMP) resistance
M9799_16280
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cenp02000
]
M9799_16280
01504 Antimicrobial resistance genes [BR:
cenp01504
]
M9799_16280
Transporters [BR:
cenp02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
M9799_16280
Antimicrobial resistance genes [BR:
cenp01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
M9799_16280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF_C
MerR-DNA-bind
Motif
Other DBs
NCBI-ProteinID:
UYG51586
LinkDB
All DBs
Position
complement(3572724..3575915)
Genome browser
AA seq
1063 aa
AA seq
DB search
MWFTKVSLHNPVFATMVMVALMVLGMFSYQRLKVDQFPNVDFPVVVVTVDYPGASPEIVE
SEVTRKVEEAVNSIAGINALTSRSYAGTSLVVIEFQLHIEGRQAADDVREKVASVRPLLR
DEVEEPRVLRFDPADAPVWSLAVLPTGGAGGQGKAMSAVELTSWADQVLKKRLENVRGVG
AVNLVGATPREINLYLDPQALEAFGISVEQVAQAVRSENQDLPVGAVRSLAQERMVQIDA
RMQRPEDFAEIIVAQRGGSTVRLGQLARVLDGPQEVESLALYNGQRSLLLSVQKAQGDNT
IEVVEGLRRAVAGMQAELPPGVRLEPIGDMARPIRVAVDNVRQTLIEGAVLTVLIVFLFL
NSWRSTVITGLTLPIALIGTFLFMHWLGFSINMVTLMALSLCVGLLIDDAIVVRENIVRH
LQMGKTPYAAAMDGTQEIGLAVLATTLSIVAVFLPIGFMQGIIGKFFHEFGLTIVVAVLI
SMFVSFTLDPMLSSVWHDPSVHGEARQDRPRSLYERSIGRVTAWFERATDQLAGVYQQIL
AWALGHRLATAVAALAIFAASVMMVPLLGTEFVPKADFSETTVQFHTPQGSSIEATEAKA
RQVEAVIRALPEVRYTLTTINTGSARGKTHANIYVRLTDRNQRTRGVEAMAIELRQQLRR
IAGITVTQVGLLEPVGGQKQIAFSLQGQDLAELGRLNRQAMELIRDIPGLVDVESSLESD
TPRVTLAIKREAASDLGLTTGAVASALRTLLAGQDVGNWRAGNDETYDVQLRLAPEDRLA
PLQLARLPLLVTGADGTRRNIRLDQVVEIRESAGPSQINRRALTREVSITANASLRSVGE
VSADIREALKGLALAPGYSYQFNGSTKDMDESFGYALSALALAVVFIYMILASQFRSFVQ
PLALMTALPLTLIGVVLALLMFGSALSMFSMIGVIMLMGLVTKNAILLVDFAIRARMDSV
DAATGAVTPGLERGPALLLAARVRLRPILMTTLAMVFGMLPLALAVTEGSEQRAPMGQAV
IGGVITSSLLTLVVVPVMYCYMDDLANWARRLAGRTRHKAGPD
NT seq
3192 nt
NT seq
+upstream
nt +downstream
nt
atgtggttcaccaaagtcagcctgcacaacccggtcttcgctaccatggtcatggtcgcg
ctgatggtgctgggcatgttctcctatcagcggctcaaggtcgaccagttccccaacgtg
gacttcccggtcgtggtggtgacggtggattatcccggcgcctcgcccgagatcgtggag
agcgaggtcacgcgaaaggtcgaggaagcggtcaactccattgccggcatcaacgcgctg
acctcacgcagctatgcgggcaccagcctggtggtcatcgagttccagctgcacatcgag
gggcggcaggctgcggacgatgtgcgcgagaaggtggcctcggtgcggccattgctgcgt
gacgaagtggaggagccgcgcgtgctgcgcttcgatccggccgatgcgccggtatggtct
ctggccgtgctgcccacagggggtgcaggtggccaaggcaaggcgatgtccgcggtcgag
ctcaccagctgggccgaccaggtgctgaaaaagcgcctggagaacgtacgcggcgtcggc
gccgtgaacctggtgggcgccaccccgcgcgagatcaatctctatctcgacccccaggcg
ctggaagccttcggcatcagtgtggagcaggtggcgcaggccgtgcgcagcgagaaccag
gacctgccggtgggggcggtgcgctcgctggcgcaggagcgcatggtgcagatcgacgcg
cgcatgcagcgccccgaggacttcgccgagatcatcgtcgcgcagcgcggcggcagcacg
gtgcgcctggggcagctcgcgcgcgtgctggacggcccgcaggaagtcgagagcctggcg
ctgtacaacggccagcgcagcctgctgctgtcggtgcagaaagcccagggcgacaacacc
atcgaggtggtcgaggggctgcgccgcgcggtcgccggcatgcaggccgagctgccgccg
ggcgtgcgcctggagcccatcggcgacatggcgcggccgatccgcgtggcggtggacaac
gtgcgccagacgctgatcgagggcgcggtgctcacggtgctgatcgtgttcctgttcctc
aattcctggcgctcgacggtcatcaccgggctcacgctgccgatcgcgctgatcggcacc
ttcctgttcatgcactggctgggcttttccatcaacatggtgacgctgatggcgctgtcg
ctgtgcgtggggctgctgatcgacgacgccatcgtggtgcgcgagaacatcgtgcgccac
ctgcagatgggcaagacgccctatgccgcggccatggacggcacgcaggagatcgggctg
gcggtgctggcgacgacgctgtccatcgtggccgtgttcctgcccattggcttcatgcag
ggcatcatcggcaagttcttccacgagttcggcctgaccatcgtggtggcggtgctgatc
tcgatgttcgtgagcttcacgctcgacccgatgctgtcgagcgtctggcatgaccccagc
gtgcatggcgaggcgcggcaggaccggcccaggagcctttacgaacgcagcatcggccgc
gtcaccgcctggttcgagcgtgccaccgaccagctcgccggcgtctaccagcagatcctg
gcctgggcactgggccaccggctggcgacggcagtggcggcgctggcgatcttcgcggcc
agcgtgatgatggtgccgctgctgggcaccgagttcgtgcccaaggccgacttctccgag
accacggtgcagttccacacgccccagggcagctccatcgaggccacagaggccaaggcg
cggcaggtggaggcggtgatccgcgcgctgcccgaggtgcgctacacgctcacgaccatc
aacaccggctcggcgcgcggcaagacccatgccaatatctatgtgcgcctcaccgaccgc
aaccagcgcacgcgcggcgtcgaggcgatggccatcgagctgcgccagcagttgcgccgg
atcgcgggcatcaccgtgacccaggtcgggctgctcgagcccgtgggcgggcaaaagcag
atcgcgttctcgctgcagggccaggacctggccgagctcgggcggctgaaccggcaggca
atggagctgatacgcgatatcccggggctggtcgatgtcgaatcgagcctggaaagcgac
accccgcgcgtgacgctggccatcaagcgcgaggccgcgtcggatctggggttgacgacg
ggtgcggtggccagcgcgctgcgcacgctgctggccggccaggacgtgggcaactggcgc
gccggcaacgacgagacctatgacgtgcagctgcgcctggcgcccgaggaccggctggca
ccgctgcagctcgcgcggctgcctctgctggtcacgggcgcggacggcacgcgccgcaac
atccggctggaccaggtggtcgagatccgcgaatccgcgggcccgagccagatcaaccgc
cgcgcgctgacgcgcgaggtatcgatcaccgccaacgcttcgctgcgctcggtgggcgag
gtctcggccgatatccgcgaggcgctcaagggcctggcgctggcgccgggctacagctac
cagttcaacggctcgaccaaggacatggatgaatccttcggctatgcgctgtcggcgctg
gcgctggccgtcgtgttcatctacatgatcctggccagccagttcaggagcttcgtgcag
ccgctggcgctgatgaccgccctgcccctgacgctgatcggcgtggttctggcgctgctg
atgttcggctcggcgctgtcgatgttctcgatgatcggcgtgatcatgctgatggggctg
gtgacgaagaacgccatcttgctggtggatttcgcgatacgcgcgcgcatggacagcgtc
gacgccgccaccggcgccgtcacgccgggcctcgagcgcggcccggcgctgctgctggcg
gcacgggtgcggctgcggccgatcctgatgaccacgctggccatggtcttcggcatgctg
cccctggcgctggccgtcaccgaggggtcggagcagcgcgcgcccatgggccaggccgtc
attggcggcgtcatcacctcctcgctgctgacactggtcgtggtgcccgtcatgtactgc
tatatggacgatctcgccaactgggcgcggcggctggcggggcgaacacgccacaaagcc
gggcctgactga
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