Crinalium epipsammum: Cri9333_0078
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Entry
Cri9333_0078 CDS
T02373
Name
(GenBank) UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
cep
Crinalium epipsammum
Pathway
cep00300
Lysine biosynthesis
cep00550
Peptidoglycan biosynthesis
cep01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cep00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Cri9333_0078
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Cri9333_0078
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
cep01011
]
Cri9333_0078
Enzymes [BR:
cep01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
Cri9333_0078
Peptidoglycan biosynthesis and degradation proteins [BR:
cep01011
]
Precursor biosynthesis
Amino acid ligase
Cri9333_0078
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
AFZ11078
UniProt:
K9VSQ7
LinkDB
All DBs
Position
complement(105457..106938)
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AA seq
493 aa
AA seq
DB search
MKLRELLETVPNLLETPNHPALDAEVKGLKTNSHACQAGDLFIGMPGTRVDGGEFWHSAL
ASGAIAAIVSPQAAQKHPIADACVISAADMTQACAAVATAFYGYPGRQLNLIGVTGTNGK
TTTTHLIEFLLNHQQHPTALFGTLYTRWSGYQETATHTTPFAVELQKQLADAIAAGCKMG
VMEVSSHALAQGRVLGCPFEVAVFTNLTQDHLDYHRDMEDYFAAKALLFSPEYLQGRAVI
NLDDDYGKRLIEKSPSEKIWSYSVNDSKADLWTSDLNYGQTGVSGMLHTPAGEMAFSSPL
VGQYNLENLLAAVGTILHLGLDLESVVQALPEFVGVPGRMERVQITPEQDISVIVDYAHT
PDSLENLLKAARPFIQGKMICVFGCGGDRDRTKRPLMGAIAAELADQVVVTSDNPRTEDP
EKILQDVLAGIPESVKPIVNSDRATAIQTAILEAKPGDGVLIAGKGHEDYQILGTEKIHF
DDREQARDALSKR
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgaagttacgagagttactagaaactgttcctaatttgttggaaacgccaaatcatccg
gcgttggatgctgaagttaaaggcttgaaaactaattctcatgcttgtcaggcaggggat
ttgtttattgggatgccaggaactagggttgatggtggggagttttggcatagtgcttta
gcctctggtgcgatcgctgctatagtttccccacaagcagcacaaaaacatcccatagca
gatgcttgtgtgatttcagcagcagatatgactcaagcttgtgctgctgtagcgacggct
ttttatggctatccagggcgacagctaaatttgattggagttacgggtacaaatggcaaa
actactacgactcatttaattgaatttctgctaaatcatcaacagcatccgacagcttta
ttcggtacactatatacccgttggtctggttatcaggaaactgctacacataccacgccg
tttgcggtggaattgcaaaaacaattagctgatgcgatcgcggctgggtgcaaaatgggg
gtaatggaagttagttcccacgcgctggcgcaaggaagggtgttaggttgtccatttgaa
gtggcggtgtttaccaatttgacgcaagatcatttggactatcaccgcgatatggaagat
tattttgctgctaaagctttgctatttagccctgaatatcttcaaggtcgcgctgtaatt
aatttagatgatgattacggaaagcggttaattgaaaaatcaccctcagaaaaaatttgg
agttacagcgttaacgattctaaggcggatttgtggactagcgatctaaattatgggcaa
acaggtgtgagtggaatgctacacactcctgcgggtgagatggctttttcttcgccgttg
gtaggtcagtataatctggaaaacttacttgccgcagtggggactattttacatttaggc
ttggatctagagtctgtggtgcaagcgttaccagaatttgtgggggttccagggcggatg
gaacgggtgcaaataacgcctgagcaagatattagtgtgattgtagattatgctcatacg
ccggatagtttggagaatttgctgaaggctgcgcgaccgtttattcagggtaagatgatt
tgtgtgtttggttgtggaggcgatcgcgatcgcactaagcgtcctttgatgggtgcaatt
gcagccgaacttgccgatcaagttgtggtaacttctgataacccgcgtactgaagatcca
gaaaagattctgcaagatgttttagctggaatacctgagtcagttaaaccaatagtaaat
agcgatcgcgctactgcaattcaaacagctattttagaagcaaaacctggtgatggtgtt
ctaattgctggtaaagggcatgaagattatcaaatattgggaactgaaaaaatccacttt
gacgatcgcgaacaagcaagagatgctttaagcaaaaggtaa
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