Chanodichthys erythropterus (predatory carp): 137004904
Help
Entry
137004904 CDS
T10334
Symbol
nphs1
Name
(RefSeq) nephrin isoform X1
KO
K24496
nephrin
Organism
cery Chanodichthys erythropterus (predatory carp)
Pathway
cery04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
cery00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
137004904 (nphs1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cery04990
]
137004904 (nphs1)
Domain-containing proteins not elsewhere classified [BR:
cery04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
137004904 (nphs1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
I-set
C2-set_2
ig
Ig_2
V-set
fn3
C2-set_3
Ig_VEGFR-1-like_5th
FN3_DSCAM-DSCAML_C
NDNF
Motif
Other DBs
NCBI-GeneID:
137004904
NCBI-ProteinID:
XP_067221699
LinkDB
All DBs
Position
17:complement(27555471..27674623)
Genome browser
AA seq
1239 aa
AA seq
DB search
MDFLFSLVLSSAWVFLLVDFKGVCGQQAFKTEPRNVTVKAGATTLLKCEVLRASGAVQWV
KDGLLLGPQRSLPGYPRYSMTGDQQKGQYHLQILNISLEDDGPYECQVGQSVSSRAIVSR
TAWLNVQIPPSQPYIQLESDEPWVEGDEYTVTCIAPDAKPPAEITMFRDGEELTETDSFT
MSGSQDKLLNTHAEVIIRARSSDDTRGLTCRAKNPASPRALETGMTMRVYFPPQAPVIVG
LGNEEVKAGSFLRVVCMSYGGNPLATLHWIKNGEVLSTSWEVDVVSRMSSSVLKMEVKPQ
DNHAVLQCESVNQVSRSPMSLTRTLTVLFEPAEVTLLGSFEAVEGQEINLSCYTSSSNPP
VHIRWWLGFKELNRTNVTISEGDNGGMMTMSNLTHKVSREDNGLPLTCEAFNKGTRFSSV
RSENLIVYYPPQKVWLDAPLPNVFLHAGKTLRLVCFSSGGNPTGQLVWLKNNKVVPTASK
QVSSERGVSRDLLLTLQPSDNLATYRCDSSNKAKKVISAQTKLRVLFPAVSVKIVAKQKE
LRKGQTLDLDCLAGSSNPTANISWSLGPMMLKGVDQAPKKAEFGGMSRTSKLSLTLDSHH
WKKRITCQAFSNVLSEGVNNFYSLNVLFPPEFSDDQPDEVQVIEDETATLPVKVLANPDE
ITCDWIFQGEKLVKERDPRYHFDDWTLEIVNVSRRDGGDYIIECSNAEGKNRTKLKLDVQ
YSPTVHMKSDPVSVNLGDTADLLCVADANPITSSMFSWKWMGEEEVDDLGEQSEDEGTGL
LTIYEVTRDQAGFYQCTADNGIAPPGSVEGQLIVRFAPELQKGPQWKKVASRGDGSNDAN
VVCQAQGVPRVHFNWAKNGFPLDLGNPRYEEKTVVTGTIHTSVLTVINVSAALDYAIFTC
TAHNSMGEDSLDIQLLSTNHPDPPSDLKLLRVNHNSVTLEWMPGFDGGLTQNFRVRYQWA
GSVSFMYVDVFPPTATVYTVTGLNPSTAYNFSVNALNTMGESSYADNNKILTVTTADAEE
ADDGVSTADKDPALAGHGLPVYAVVILVVGGLLLFLNPLSCFLLARWKKRGWSLKEDTRS
ISQETKSEEQRSTSSSSTRYASRELINASAQQTLLIDSSSEPDSNVYESYGQQEIPHYYY
SPALYTHLEGPEDHDGRHGTSPLAHDYEEVTGWGTYQDLQGYSLLPPSAHSDPRALSTYH
EGRVYGKADVDVAAGVYDSMVYRRRRDTDLPFELRGELV
NT seq
3720 nt
NT seq
+upstream
nt +downstream
nt
atggatttcttattttcactcgtactctcaagtgcctgggtttttcttcttgtggatttc
aaaggtgtatgtgggcagcaggcatttaagacagagccacgtaatgtgacggtcaaggcg
ggggccacaactctgctgaagtgtgaagtgctgagggcctcaggggccgtgcagtgggtt
aaagatgggctgctcctgggacctcagagatcgctgcctggctacccacgctacagcatg
acaggagaccagcagaaaggccagtaccatcttcagattctcaacattagtttggaagac
gacggcccctacgagtgccaagtgggccagtccgtgagcagccgtgccattgtgtcccgt
acagcctggctcaatgtgcagatcccaccctcacagccgtacatccagctggagtctgat
gagccgtgggtggagggagacgaatatacagtgacctgcattgctcctgatgcaaaacct
cctgcagaaatcaccatgttcagagatggagaggagctgacggaaaccgattcttttaca
atgtcaggctcacaggataagcttttaaacactcatgccgaagtcataatcagggcacga
agttcggacgacacacgagggctgacgtgtcgagcgaagaacccagcaagccctcgagct
cttgagactggcatgaccatgagggtatactttcccccgcaggctccggtgatcgtagga
ttaggaaatgaagaggtcaaagctggttcctttctgagggtggtgtgcatgtcatatgga
ggcaaccctttagccactctgcattggattaagaatggagaagtcctgtccactagctgg
gaggtggacgttgtgtcacgtatgtccagtagcgtgttgaaaatggaggtgaagccacag
gacaatcatgctgtgctgcagtgcgagagcgtcaaccaagtgtctcgttcaccgatgtcc
ctcactcgcactctcaccgtattgtttgagccagctgaggtaacgttactgggctccttc
gaagctgtggagggacaggagatcaatctgagctgttacacttcctctagcaatccgccg
gtccacatccgctggtggcttgggttcaaggagctcaacagaacgaatgttaccatctct
gagggggataatggtgggatgatgacgatgtctaacttgacgcataaagtgtcgcgtgag
gacaacggtcttcctctgacttgtgaggcattcaataaaggcacccgcttctctagtgtt
cgatctgaaaatctcatcgtttactatcctcctcagaaggtgtggttagatgctcctcta
ccaaacgtcttcttacacgctggtaaaactcttcgtttagtctgtttctccagtggtgga
aatcccacaggtcagctggtgtggttgaagaacaataaagtcgtgccgaccgcatcaaag
caggtgtcctcagagcgtggtgtgtcacgagatctccttctcaccctccagcccagcgac
aatctggccacctaccgctgtgactcctccaacaaagccaagaaagttatctctgcccaa
accaaactcagggttctgtttccagcagtgagcgtgaagatcgtggccaagcagaaggag
ctgcgcaagggtcagacactggatctggactgcctggctggcagcagcaatcccactgca
aatatcagctggagtttgggccccatgatgctgaaaggagttgaccaggctcctaaaaag
gctgaatttggtgggatgtcccgaaccagtaagctgtccctcactcttgattcacatcac
tggaagaaaaggatcacctgccaggccttcagtaatgtgctgtccgagggggtcaacaac
ttctacagtctgaatgtgctctttcctccagagttttcagatgaccaacccgatgaggtc
caggtcattgaggatgaaaccgccacgcttcctgtcaaagtcttggccaatccggatgaa
atcacctgcgactggatttttcagggcgagaagcttgtgaaagaaagagatcctcgttat
cacttcgacgattggaccctggaaattgtgaacgtttctcggcgagacgggggcgattac
atcatagagtgttccaacgctgaggggaagaaccgcacaaaactcaaactggatgtacag
tattccccgactgttcatatgaagtctgatcctgtgtctgtgaacttgggagacaccgct
gacttactgtgtgttgctgacgccaaccccatcacctccagtatgttttcgtggaagtgg
atgggtgaagaggaagtagatgatctaggagagcagagtgaagatgaaggcactggtttg
ttaactatatatgaagtgacccgtgaccaggcaggtttttaccagtgtacagcagacaat
ggcatagcacctccaggcagtgttgaaggacagctcatcgtacgctttgctcccgagctt
cagaaggggccgcagtggaagaaggtggccagccgtggggacggcagcaacgatgcaaat
gtggtgtgtcaggcacaaggcgttcctcgtgtgcacttcaactgggcaaaaaatggattc
cctttagacttgggcaaccccaggtacgaggagaagactgtggtgacaggtaccatccac
acaagcgttctgaccgtcataaacgtgagtgcagcgctggactacgccatcttcacctgc
actgcccacaatagcatgggagaagactctctagacatccagctcctcagcaccaaccac
cccgatcccccatcagacctgaagctgctccgtgtcaaccataactctgtgactctggaa
tggatgcctgggtttgacggtggtttgacacagaacttccgtgtcaggtaccagtgggcg
ggatcggtgagtttcatgtatgtggacgtgtttcctccgacagctactgtgtatacagtc
acgggcctcaacccttcaactgcgtacaacttttcggtcaacgctctcaatacaatggga
gagagcagctatgcagacaacaacaaaatactgacggtcaccactgccgatgcggaggaa
gctgatgacggggtctccacagcagacaaggacccagcacttgcaggtcatggtcttcct
gtctatgccgtggtgatcctggttgtgggtggcctacttttattcctaaatccattgagc
tgctttctattggccagatggaaaaaaagagggtggagcctgaaagaagacaccaggagc
atttcacaggagacgaaaagtgaggagcagaggtccacgtcgagcagctcaacacgctat
gcgagcagagagcttatcaacgcctcggcacagcaaacgctcctcattgacagcagctcc
gagcctgacagcaacgtctatgagagctatggacagcaggagattcctcattattactac
agtcctgcgctgtatactcaccttgaaggccctgaggatcatgatggcagacacggcaca
agccctctcgctcatgactacgaagaggtgacaggctgggggacgtaccaggatctgcag
ggctactcactgctgcccccttctgcccactctgatccacgagcactctctacctatcat
gagggaagagtatacggtaaagctgatgtggacgtagcagccggagtttatgattctatg
gtgtacagacgcaggagagacacagacttgccgtttgagctccgaggggagcttgtttaa
DBGET
integrated database retrieval system
