Chanodichthys erythropterus (predatory carp): 137006239
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Entry
137006239 CDS
T10334
Symbol
traf3
Name
(RefSeq) TNF receptor-associated factor 3
KO
K03174
TNF receptor-associated factor 3
Organism
cery Chanodichthys erythropterus (predatory carp)
Pathway
cery04620
Toll-like receptor signaling pathway
cery04621
NOD-like receptor signaling pathway
cery04622
RIG-I-like receptor signaling pathway
cery05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cery00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
137006239 (traf3)
04621 NOD-like receptor signaling pathway
137006239 (traf3)
04622 RIG-I-like receptor signaling pathway
137006239 (traf3)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
137006239 (traf3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
zf-TRAF
TRAF3_RING
zf-C3HC4
Rod_CreS
PEA2_C
zf-C3HC4_2
NOCA1_mid
Sina_ZnF
RING_XB3-XBAT31
LIP-1
EzrA
zf-RING_4
BLOC1_2
YonD_C
zf-TRAF_2
Exonuc_VII_L
ATG16
Motif
Other DBs
NCBI-GeneID:
137006239
NCBI-ProteinID:
XP_067222965
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All DBs
Position
18:25420443..25435958
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AA seq
573 aa
AA seq
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MSAGRNVEQQIALQQRPPSLAMSSMAQRPRPEPGFLPIHGGFRDRFVTTPEPKYCCEACR
LVLCIPRQTECGHRFCESCITDLLSKPNPVCPADLEPLFEDKIFRDVCCNREIMALKVYC
RSEKNGCKEQMSLQRVMDHLEVCPYFEVPCPLGKCKEKMMRKDMPEHLSRKCKHREITCE
FCNHKMALTELQKHKETVCPAFPVACPNHCSFSSILRSELSSHQHDCPKAQVTCSFIRFG
CTYKGLNQEMREHETSFASEHLRMMAVRNTTLEAKVEDVKSELMERYKVLPGLSSRLAEV
EAQYEEMREKNRQLEQKLVSMQMLMSSHSEKLLEVEMELRELRPLRTMREEVEALRGSVE
SMRSVVSSLDSGRVGSGSGSHTLGSLEQQLSRHDDMMSVHDIRLAEMDLKLQVLETASFN
GTLIWKIRDYKRRKQEAVASKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFF
VVMRGEYDALLPWPFKQKVTLMLMDQGPARKHLGDAFKPDPHSSSFRRPTGEMNIASGCP
LFVAQTVLENGTYIKDDTIFIKVTVDTSDLPDP
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcagggcgtaatgtggaacagcagattgccctgcagcagcgtccgccatctctt
gctatgtcctccatggcccagcggcccaggcccgagccgggcttcttgcccattcacgga
ggcttcagggaccgctttgtcacgacacctgagccaaagtattgctgcgaggcctgcagg
ctagtgctctgtataccgcggcaaactgagtgtggacatcgcttctgcgagagttgcatc
acagacttgctcagtaagcctaacccagtgtgtccagctgatctagaaccactctttgaa
gataagatattccgggatgtttgctgcaatagggaaattatggctctgaaggtctactgt
cgaagtgagaaaaatggatgtaaagaacagatgagtttacaacgggtcatggaccacttg
gaagtttgtccgtactttgaggtgccatgccccttgggaaagtgtaaggagaagatgatg
aggaaagacatgcccgagcacttgagccgcaaatgcaaacacagagagatcacctgtgaa
ttctgcaatcataagatggccctcactgagttacagaaacacaaagaaacagtctgtcct
gcatttcctgtagcatgccctaatcactgctcgttttcttccattctaagaagtgagctg
tccagtcaccagcatgactgtccaaaggcccaggtgacctgctccttcattcgctttggt
tgcacctataaggggctgaatcaagagatgagagaacatgagaccagttttgcatccgag
cacttgagaatgatggcagtcaggaacaccacactagaggccaaggtcgaggacgttaag
agcgagctgatggagcgttataaagttctgcccggcctcagcagtcgtcttgcagaggta
gaagcacagtatgaagagatgagagaaaagaacaggcagctggagcagaagctagtcagc
atgcagatgttgatgagctctcactcagagaaactgcttgaggttgagatggagctgcgg
gagcttcgtcctctgcgaactatgagggaagaggtggaggctctgagagggtctgtggag
agcatgcgttcagtcgtatcttctctcgactcgggtcgcgttggttccggttccggttct
cacaccctgggctccttagagcagcagctctcacgtcacgatgacatgatgagtgtccat
gacatccggctggcagagatggacctgaagctgcaggtgctagagacggccagcttcaat
ggcacactcatttggaagatccgtgactacaaaaggcggaaacaggaagccgtggcctcc
aaaaccctctcgctctacagccagcccttctacacgggctatttcggctataagatgtgt
gcccgcgtttatctcaatggggatggaatgggaaaaggtacacatctatcgctcttcttc
gtggtcatgcgcggggaatatgacgccttgctgccttggccgtttaaacagaaagtaaca
ttaatgctaatggaccaggggccggcacggaaacacttaggtgatgccttcaaaccagac
ccccatagcagtagctttcgccggcccactggggaaatgaacattgcctcaggctgtccg
ctcttcgtggctcagactgtcctggagaacggaacctacatcaaagacgataccatcttc
atcaaagtgactgtagacacctctgacctcccggacccctga
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