Chanodichthys erythropterus (predatory carp): 137007076
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Entry
137007076 CDS
T10334
Name
(RefSeq) thrombospondin-1-like
KO
K16857
thrombospondin 1
Organism
cery Chanodichthys erythropterus (predatory carp)
Pathway
cery04115
p53 signaling pathway
cery04145
Phagosome
cery04148
Efferocytosis
cery04350
TGF-beta signaling pathway
cery04510
Focal adhesion
cery04512
ECM-receptor interaction
cery04820
Cytoskeleton in muscle cells
Brite
Membrane trafficking [BR:
cery04131
]
Endocytosis
Phagocytosis
Opsonins
137007076
Glycosaminoglycan binding proteins [BR:
cery00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
137007076
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
137007076
NCBI-ProteinID:
XP_067224470
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Position
18:39388612..39397496
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AA seq
1174 aa
AA seq
DB search
MILRGLVLCLLLWSSESSRHAEMLDDDTVFDLFELTHLHKKHHGVSLVKGPDPYSPAYKI
LNPNLIPSVPELSFRDLIYSIQSERGFIFTANLKQAKRTRGSLISVERTDGTGSVFEIIS
NGKANTVDLVYWTASGQHVVSIEDVSVANGHWKNITVFVQEDRAQVYVGCEEINTQELDV
PIQQILSQESADIASLRIAKGAAKSDRFMGVLQNVRFVFGTTLDAILRNRGCESSTFITD
VMNFENSVNGSSPAIRTDYTGHKSKGLQDICGFSCDDLTSMFTELKGLGVVVKQLSNELR
QVTADNSLIMNQIQIHKGVCLHNGIVYRDKDEWTVDSCTHCTCQNSATVCREISCPLMPC
ANATVPDGECCPRCGTPSDAGVEDGWSPWSEWTHCSVTCGRGVQQRGRSCDRINSNCDGT
SVQTRDCYTQECDKRFKQDGGWSHWSPWSSCSVTCGEGVITRIRLCNSPTPQMGGKDCEG
DGRQTEPCQKAPCPVNGGWGPWSPWDSCSVTCGGGLQRRHRLCNSPAPKYGGKECLGDSK
GSRMCNAQLCPVDGCLSNPCFAGTKCTSFPDGSWTCGECPVGYTGDGVHCQDIDECKEVP
DACFVLNGVHQCENTEPGYNCLPCPPRYSGQQPFGRGMEQAIANKQVCTPRNPCEDGSHD
CNKNANCIYLGVFSDIMFRCECKPGYAGNGYICGEDPDLDGWPNTDLHCVENATYHCKKD
NCPDLPNSGQEDYDKDGTGDACDSDDDNDGIPDEGDNCPFIFNPRQYDHDRDQVGDRCDN
CPYDSNPEQTDTDNNGEGDACAIDIDGDGILNEKDNCPYVYNTDQRDTDWDGVGDHCDNC
PLEHNPDQIDSDSDNIGDKCDSNQDIDEDGHQNNLDNCPYIPNANQVDHDKDGKGDACDH
DDDNDGVPDDKDNCRLAFNPDQLDSDGDGRGDVCKYDFDQDNVLDIHDVCPENFAISETD
FRRFQMVPLDPTGTSQIDPNWVVRHQGKELLQTVNCDPGIAVGYDEFNAVDFSGTFFINT
DRDDDYAGFVFGYQSSSRFYVVMWKQITQTYWSHTPTKAQGYSGLSIKVVNSTTGPGEHL
RNALWHTGDTEGQVRTLWHDPKNIGWKDYTAYRWHLIHRPKTGHIRVIMYEGKKVMADSG
SITDKTYAGGRLGLFVFSQEMVYFSDLKYECRDV
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgattctcagaggactcgttttgtgtctcttattgtggagttccgagagcagcagacat
gcagaaatgctggacgatgataccgtgttcgacctgttcgagctcactcatctgcataag
aagcatcacggggtgagtttggtgaagggacccgatccatacagccccgcgtacaagatc
ctgaacccgaacctgatcccctccgtgcccgagctctccttcagggacctgatctactcc
atccagagcgagagaggcttcatcttcaccgccaacctcaagcaagccaaacgcacccgg
ggcagcctgatctccgtggagaggactgacggcaccgggtccgtctttgagatcatatcc
aatgggaaagccaacaccgtggatctggtgtactggaccgcgagcggacagcatgtggtg
tccatcgaggacgtgagcgtggcgaacgggcactggaagaacatcacggtgtttgtgcag
gaggatcgagctcaggtttatgtgggctgcgaggagatcaacactcaagagctcgatgtt
ccgatccagcagattctgagtcaggagagcgcggacatcgccagcctgaggatcgccaaa
ggagccgccaaatccgatcgcttcatgggagttcttcagaatgtgcggtttgtttttgga
acgacgctggacgcgattttacgcaatagaggatgcgagagctcaaccttcatcacagat
gtcatgaactttgagaactccgtgaatggatccagtccggccatccgcactgattacacc
ggacacaagtctaaaggtctgcaagacatctgtggattctcctgcgacgatctgaccagc
atgtttacggagctcaagggactcggtgtggtggtgaagcagttgtcaaatgagctccgc
caagtgacagcagacaacagcttaataatgaaccagattcaaatccacaaaggagtctgt
ctgcacaacggcattgtttaccgagacaaagacgagtggacggtggacagctgcacgcac
tgcacatgtcagaactccgccactgtgtgtcgtgaaatctcctgccctctcatgccctgc
gccaacgccactgtcccagatggtgaatgctgcccgcgctgcggaacaccgagtgatgcg
ggtgtagaagacggctggtcgccctggtccgaatggacacactgttcggtgacctgtgga
agaggcgttcagcagcgcggacgctcttgtgaccggatcaacagcaactgcgatggcacg
tccgtccagacgagagactgttacacgcaagagtgcgacaaacgcttcaagcaggatggc
ggctggagccactggtctccctggtcttcctgctcagtgacgtgtggcgagggcgtcatc
actcgcatccggctgtgcaactccccaacgcctcagatgggtggcaaagactgcgaggga
gatggtcgccagactgagccatgccagaaggccccgtgcccagtgaatgggggttgggga
ccctggtcaccatgggactcttgctccgtcacctgcggtggaggactgcagcgccgacac
cgtttgtgtaacagccctgctcccaaatacggtggaaaagaatgtctgggtgactccaaa
ggaagccgtatgtgcaacgcccagttgtgtcccgttgatggttgtctctctaacccgtgc
tttgccggcaccaaatgcactagcttccccgatggctcctggacgtgcggagagtgtccg
gttggatacactggggatggagtccactgtcaagacattgatgagtgcaaagaagttccc
gatgcgtgttttgtgctcaatggagtccatcagtgtgagaacacggaaccgggctacaac
tgcctgccctgcccaccgcgctactccggacaacagccctttggcagaggaatggagcag
gccattgccaataaacaggtctgcacaccaagaaacccatgtgaggacggcagccatgac
tgcaataagaatgccaactgcatctacctaggagtcttttccgacatcatgttccgctgt
gaatgtaaaccaggctatgctgggaatggttacatctgcggagaggacccagacctggac
ggctggccaaacacagacctccactgtgtggaaaacgccacctaccactgcaagaaggac
aactgtcctgaccttcccaactctgggcaagaagactatgacaaagatggaactggagat
gcttgtgacagtgatgatgacaatgatgggatccctgatgagggggacaattgcccattc
atcttcaacccaagacagtacgaccacgaccgcgatcaagttggcgaccgatgcgacaac
tgcccgtacgacagtaatccagaacagaccgacaccgacaacaatggcgagggtgatgcg
tgtgccatagacatcgatggtgacggcattctgaatgagaaggacaactgtccgtatgtg
tacaacactgaccagagagacactgactgggacggagtcggtgaccactgtgacaactgc
ccgctggagcacaaccctgaccagattgactcagactcggacaacattggagacaagtgt
gacagcaaccaagacatcgatgaggatggacatcagaacaacctcgacaactgcccctac
atccccaacgccaaccaggtcgaccacgacaaggatggcaaaggagacgcctgcgatcat
gacgatgacaatgatggcgtacctgacgacaaagacaactgccgactcgccttcaaccca
gaccaactggattcggatggtgatggccgaggtgacgtttgcaaatacgactttgaccaa
gataacgtgctggatattcatgatgtctgcccggagaactttgccatcagtgaaacagat
ttccgcaggttccagatggttcccctcgatcccacaggaacttcccaaatcgaccccaac
tgggtcgtccgtcaccagggcaaagaacttctgcagaccgtcaactgtgatcctggcatt
gccgttggttatgatgagttcaatgcagtggactttagcggcacgttcttcatcaacaca
gaccgtgatgacgattatgccggctttgtgtttggctaccaatccagctcacgtttctat
gtggtgatgtggaaacagatcacacagacctactggtctcatacgcccaccaaagcccag
ggttactctggactgtccattaaagtagtgaactccactacaggaccgggcgaacatctc
aggaacgctttgtggcacactggagacaccgaaggacaagtgcgtaccctttggcacgac
cccaagaacattggctggaaggattacactgcttacagatggcacctgatccacagaccc
aaaaccggacacatcagagttatcatgtatgagggcaagaaagtcatggcagattcagga
agcatcactgacaagacatacgctggaggaagacttggcctctttgtcttctctcaagag
atggtttacttctcagacctcaaatacgaatgccgagatgtataa
DBGET
integrated database retrieval system
