Chanodichthys erythropterus (predatory carp): 137007076
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Entry
137007076 CDS
T10334
Name
(RefSeq) thrombospondin-1-like
KO
K16857
thrombospondin 1
Organism
cery Chanodichthys erythropterus (predatory carp)
Pathway
cery04115
p53 signaling pathway
cery04145
Phagosome
cery04148
Efferocytosis
cery04350
TGF-beta signaling pathway
cery04510
Focal adhesion
cery04512
ECM-receptor interaction
cery04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cery00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
137007076
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
137007076
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
137007076
04148 Efferocytosis
137007076
09143 Cell growth and death
04115 p53 signaling pathway
137007076
09144 Cellular community - eukaryotes
04510 Focal adhesion
137007076
09142 Cell motility
04820 Cytoskeleton in muscle cells
137007076
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cery04131
]
137007076
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
cery00536
]
137007076
Membrane trafficking [BR:
cery04131
]
Endocytosis
Phagocytosis
Opsonins
137007076
Glycosaminoglycan binding proteins [BR:
cery00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
137007076
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP_C
TSP_3
TSP_1
TSP1_spondin
VWC
TSP1_CFP_C
EGF_3
TSP1_ADAMTS
cEGF
Laminin_G_3
EGF
TSP1_CCN
Laminin_G_2
Motif
Other DBs
NCBI-GeneID:
137007076
NCBI-ProteinID:
XP_067224470
LinkDB
All DBs
Position
18:39388612..39397496
Genome browser
AA seq
1174 aa
AA seq
DB search
MILRGLVLCLLLWSSESSRHAEMLDDDTVFDLFELTHLHKKHHGVSLVKGPDPYSPAYKI
LNPNLIPSVPELSFRDLIYSIQSERGFIFTANLKQAKRTRGSLISVERTDGTGSVFEIIS
NGKANTVDLVYWTASGQHVVSIEDVSVANGHWKNITVFVQEDRAQVYVGCEEINTQELDV
PIQQILSQESADIASLRIAKGAAKSDRFMGVLQNVRFVFGTTLDAILRNRGCESSTFITD
VMNFENSVNGSSPAIRTDYTGHKSKGLQDICGFSCDDLTSMFTELKGLGVVVKQLSNELR
QVTADNSLIMNQIQIHKGVCLHNGIVYRDKDEWTVDSCTHCTCQNSATVCREISCPLMPC
ANATVPDGECCPRCGTPSDAGVEDGWSPWSEWTHCSVTCGRGVQQRGRSCDRINSNCDGT
SVQTRDCYTQECDKRFKQDGGWSHWSPWSSCSVTCGEGVITRIRLCNSPTPQMGGKDCEG
DGRQTEPCQKAPCPVNGGWGPWSPWDSCSVTCGGGLQRRHRLCNSPAPKYGGKECLGDSK
GSRMCNAQLCPVDGCLSNPCFAGTKCTSFPDGSWTCGECPVGYTGDGVHCQDIDECKEVP
DACFVLNGVHQCENTEPGYNCLPCPPRYSGQQPFGRGMEQAIANKQVCTPRNPCEDGSHD
CNKNANCIYLGVFSDIMFRCECKPGYAGNGYICGEDPDLDGWPNTDLHCVENATYHCKKD
NCPDLPNSGQEDYDKDGTGDACDSDDDNDGIPDEGDNCPFIFNPRQYDHDRDQVGDRCDN
CPYDSNPEQTDTDNNGEGDACAIDIDGDGILNEKDNCPYVYNTDQRDTDWDGVGDHCDNC
PLEHNPDQIDSDSDNIGDKCDSNQDIDEDGHQNNLDNCPYIPNANQVDHDKDGKGDACDH
DDDNDGVPDDKDNCRLAFNPDQLDSDGDGRGDVCKYDFDQDNVLDIHDVCPENFAISETD
FRRFQMVPLDPTGTSQIDPNWVVRHQGKELLQTVNCDPGIAVGYDEFNAVDFSGTFFINT
DRDDDYAGFVFGYQSSSRFYVVMWKQITQTYWSHTPTKAQGYSGLSIKVVNSTTGPGEHL
RNALWHTGDTEGQVRTLWHDPKNIGWKDYTAYRWHLIHRPKTGHIRVIMYEGKKVMADSG
SITDKTYAGGRLGLFVFSQEMVYFSDLKYECRDV
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgattctcagaggactcgttttgtgtctcttattgtggagttccgagagcagcagacat
gcagaaatgctggacgatgataccgtgttcgacctgttcgagctcactcatctgcataag
aagcatcacggggtgagtttggtgaagggacccgatccatacagccccgcgtacaagatc
ctgaacccgaacctgatcccctccgtgcccgagctctccttcagggacctgatctactcc
atccagagcgagagaggcttcatcttcaccgccaacctcaagcaagccaaacgcacccgg
ggcagcctgatctccgtggagaggactgacggcaccgggtccgtctttgagatcatatcc
aatgggaaagccaacaccgtggatctggtgtactggaccgcgagcggacagcatgtggtg
tccatcgaggacgtgagcgtggcgaacgggcactggaagaacatcacggtgtttgtgcag
gaggatcgagctcaggtttatgtgggctgcgaggagatcaacactcaagagctcgatgtt
ccgatccagcagattctgagtcaggagagcgcggacatcgccagcctgaggatcgccaaa
ggagccgccaaatccgatcgcttcatgggagttcttcagaatgtgcggtttgtttttgga
acgacgctggacgcgattttacgcaatagaggatgcgagagctcaaccttcatcacagat
gtcatgaactttgagaactccgtgaatggatccagtccggccatccgcactgattacacc
ggacacaagtctaaaggtctgcaagacatctgtggattctcctgcgacgatctgaccagc
atgtttacggagctcaagggactcggtgtggtggtgaagcagttgtcaaatgagctccgc
caagtgacagcagacaacagcttaataatgaaccagattcaaatccacaaaggagtctgt
ctgcacaacggcattgtttaccgagacaaagacgagtggacggtggacagctgcacgcac
tgcacatgtcagaactccgccactgtgtgtcgtgaaatctcctgccctctcatgccctgc
gccaacgccactgtcccagatggtgaatgctgcccgcgctgcggaacaccgagtgatgcg
ggtgtagaagacggctggtcgccctggtccgaatggacacactgttcggtgacctgtgga
agaggcgttcagcagcgcggacgctcttgtgaccggatcaacagcaactgcgatggcacg
tccgtccagacgagagactgttacacgcaagagtgcgacaaacgcttcaagcaggatggc
ggctggagccactggtctccctggtcttcctgctcagtgacgtgtggcgagggcgtcatc
actcgcatccggctgtgcaactccccaacgcctcagatgggtggcaaagactgcgaggga
gatggtcgccagactgagccatgccagaaggccccgtgcccagtgaatgggggttgggga
ccctggtcaccatgggactcttgctccgtcacctgcggtggaggactgcagcgccgacac
cgtttgtgtaacagccctgctcccaaatacggtggaaaagaatgtctgggtgactccaaa
ggaagccgtatgtgcaacgcccagttgtgtcccgttgatggttgtctctctaacccgtgc
tttgccggcaccaaatgcactagcttccccgatggctcctggacgtgcggagagtgtccg
gttggatacactggggatggagtccactgtcaagacattgatgagtgcaaagaagttccc
gatgcgtgttttgtgctcaatggagtccatcagtgtgagaacacggaaccgggctacaac
tgcctgccctgcccaccgcgctactccggacaacagccctttggcagaggaatggagcag
gccattgccaataaacaggtctgcacaccaagaaacccatgtgaggacggcagccatgac
tgcaataagaatgccaactgcatctacctaggagtcttttccgacatcatgttccgctgt
gaatgtaaaccaggctatgctgggaatggttacatctgcggagaggacccagacctggac
ggctggccaaacacagacctccactgtgtggaaaacgccacctaccactgcaagaaggac
aactgtcctgaccttcccaactctgggcaagaagactatgacaaagatggaactggagat
gcttgtgacagtgatgatgacaatgatgggatccctgatgagggggacaattgcccattc
atcttcaacccaagacagtacgaccacgaccgcgatcaagttggcgaccgatgcgacaac
tgcccgtacgacagtaatccagaacagaccgacaccgacaacaatggcgagggtgatgcg
tgtgccatagacatcgatggtgacggcattctgaatgagaaggacaactgtccgtatgtg
tacaacactgaccagagagacactgactgggacggagtcggtgaccactgtgacaactgc
ccgctggagcacaaccctgaccagattgactcagactcggacaacattggagacaagtgt
gacagcaaccaagacatcgatgaggatggacatcagaacaacctcgacaactgcccctac
atccccaacgccaaccaggtcgaccacgacaaggatggcaaaggagacgcctgcgatcat
gacgatgacaatgatggcgtacctgacgacaaagacaactgccgactcgccttcaaccca
gaccaactggattcggatggtgatggccgaggtgacgtttgcaaatacgactttgaccaa
gataacgtgctggatattcatgatgtctgcccggagaactttgccatcagtgaaacagat
ttccgcaggttccagatggttcccctcgatcccacaggaacttcccaaatcgaccccaac
tgggtcgtccgtcaccagggcaaagaacttctgcagaccgtcaactgtgatcctggcatt
gccgttggttatgatgagttcaatgcagtggactttagcggcacgttcttcatcaacaca
gaccgtgatgacgattatgccggctttgtgtttggctaccaatccagctcacgtttctat
gtggtgatgtggaaacagatcacacagacctactggtctcatacgcccaccaaagcccag
ggttactctggactgtccattaaagtagtgaactccactacaggaccgggcgaacatctc
aggaacgctttgtggcacactggagacaccgaaggacaagtgcgtaccctttggcacgac
cccaagaacattggctggaaggattacactgcttacagatggcacctgatccacagaccc
aaaaccggacacatcagagttatcatgtatgagggcaagaaagtcatggcagattcagga
agcatcactgacaagacatacgctggaggaagacttggcctctttgtcttctctcaagag
atggtttacttctcagacctcaaatacgaatgccgagatgtataa
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integrated database retrieval system
