Chanodichthys erythropterus (predatory carp): 137007874
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Entry
137007874 CDS
T10334
Symbol
irf3
Name
(RefSeq) interferon regulatory factor 3 isoform X1
KO
K05411
interferon regulatory factor 3
Organism
cery Chanodichthys erythropterus (predatory carp)
Pathway
cery04620
Toll-like receptor signaling pathway
cery04621
NOD-like receptor signaling pathway
cery04622
RIG-I-like receptor signaling pathway
cery04623
Cytosolic DNA-sensing pathway
cery05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cery00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
137007874 (irf3)
04621 NOD-like receptor signaling pathway
137007874 (irf3)
04622 RIG-I-like receptor signaling pathway
137007874 (irf3)
04623 Cytosolic DNA-sensing pathway
137007874 (irf3)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
137007874 (irf3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cery03000
]
137007874 (irf3)
04131 Membrane trafficking [BR:
cery04131
]
137007874 (irf3)
Transcription factors [BR:
cery03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
137007874 (irf3)
Membrane trafficking [BR:
cery04131
]
Autophagy
Other autophagy associated proteins
TRIM-directed selective autophagy
137007874 (irf3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IRF
IRF-3
Motif
Other DBs
NCBI-GeneID:
137007874
NCBI-ProteinID:
XP_067225664
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All DBs
Position
19:complement(26774921..26783874)
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AA seq
461 aa
AA seq
DB search
MTHPKPLFVPWLRQQIQSGRYPGVCWTNEELHQFSIPWKHALRQDSNSDDVLIFKAWAQT
SAAGDGRINGDPSVWKRNFRSALRAKGFRMILDNKNDAANPHKVYQFPSEGLSAGSEGSQ
ETDLSPDLYVEEENMFSANPPQGLEGKFTGLNLQESPPQVYEVWNQDQFYLGLEGQGLLQ
EINPCTEPQFTQMTNFQTVDTNGPFSSAGGAVGGLEQISSTEGTTAVNHHHSPAYQQPVV
CQPHGDGDQVAVPEPKLETFFRIKVYYKGRMVMDQLVENDVGFRLMYQGNMDGSSADLPV
VTLPCPEDILDQIQAKHTNDILGNLGGLEIRRLDSVVYGHRWGSSRIYWGLCKHEQSQTA
RELSKNTPEPVYFFRNYISGLMEFMQQTGSESPSYSLYFFLGEKWPDPKMKPWEKKLIMI
EVILTSLEYFKMMAVANGASSLQSVELQLSLEQMMELCDTK
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgacccatccaaaaccgctcttcgtgccctggttgcgccaacaaatccaaagtggacga
tatcctggagtgtgttggaccaatgaagaacttcatcagtttagtattccctggaagcat
gctttgagacaggactccaacagtgatgatgtcctcatattcaaggcatgggctcagact
agcgctgctggagacggcaggataaatggagacccctccgtttggaagagaaacttccgt
agcgctcttcgtgctaaaggcttcaggatgatattggacaacaagaacgatgcggctaat
ccgcataaagtgtatcagtttccatctgaaggtctttctgcaggatcggaaggatctcag
gagactgatttatctccagatctatatgtggaggaggaaaacatgttctctgcaaaccca
ccccaaggtttagagggaaaattcactggactaaacctacaggaaagtcccccacaagtc
tatgaagtttggaatcaagatcagttctatttgggacttgagggacaaggactcctccaa
gaaattaatccatgcacagaaccccagtttactcagatgaccaattttcaaaccgtggac
actaatggacccttctcttcagctgggggtgctgttggtggtttggagcagatttcatcc
actgaggggacgacggctgtcaatcatcatcattctccagcatatcagcagccggtggtg
tgtcaaccacatggtgatggtgatcaggttgccgttcctgaaccaaaactggagacgttt
ttccggattaaggtttattacaaagggaggatggtgatggatcagttggtagagaatgat
gttggattcagactgatgtatcagggaaacatggatgggtccagtgctgatctaccagtg
gtgacactaccttgtccggaagatatcctggatcagatccaggccaagcatacgaatgat
attctgggaaatctaggcggtctggagatcaggagattggatagtgtggtttatggccac
cgctggggatccagcaggatctactggggtctgtgcaaacatgaacaaagccaaacagcc
agagagctctccaaaaacacacctgaacccgtctacttcttcagaaattatatatcaggt
ttgatggagtttatgcagcagacaggcagcgaatctccttcttactctctttacttcttt
ctgggagagaagtggccagaccccaaaatgaaaccgtgggagaagaaactcatcatgata
gaggttattctgacttcactggagtattttaagatgatggctgttgcaaatggggcgtct
tcactgcagtcagtggagctacaactctctctggagcaaatgatggagttgtgtgacacc
aagtga
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