KEGG   Chanodichthys erythropterus (predatory carp): 137012350
Entry
137012350         CDS       T10334                                 
Symbol
rapgef6
Name
(RefSeq) rap guanine nucleotide exchange factor 6 isoform X1
  KO
K08020  Rap guanine nucleotide exchange factor 6
Organism
cery  Chanodichthys erythropterus (predatory carp)
Pathway
cery04517  IgSF CAM signaling
cery04530  Tight junction
Brite
KEGG Orthology (KO) [BR:cery00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    137012350 (rapgef6)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04530 Tight junction
    137012350 (rapgef6)
SSDB
Motif
Pfam: RasGEF PDZ RasGEF_N RA PDZ_6 cNMP_binding RA_2 PDZ_2
Other DBs
NCBI-GeneID: 137012350
NCBI-ProteinID: XP_067231579
LinkDB
Position
22:complement(9689181..9801722)
AA seq 1618 aa
MKFSFPEIREFNMNSSVDLSLKKALKTPPTRRTAEDLNIIYAHLYHMDVLSHLREHQLRS
MCMTARYERYDANHVLFYADSISTCWYVLLSGSVLVKEHMYLARCCFGTQRGGRRGCECI
TLEPSEMIVVENTSESDDAALQRHGSQQQSRRRFHKVNAGGERQLIVDAQDASDTLPGDL
NKMHLTDHPHQQMHMPPSQSGCSIASDSGSSSLSDIYQATESEMGDVDLSGLPEAPVDSE
EEEEDEDIERSSEALLGRDLVRECLEKDAVDRTDDDIEQLLEFMHQLPAFANMTMSVRRE
LCRVMMFEVVEQEGTIILQDKQELDLWYVILNGAVEISYGDGRAEILCMGNSFGISPSLD
RQFMTGVVCTKADDCQFVCIAQEDYCRILNHVEKNTHKVEEEGEIVMVKEHRELDRSGTR
KGHVVIKGTPERLIMHLVEEPSVVDPTYIEDFLLTYRTFLSSPMEVGKKLLEWFKVDSLR
DTVTRIVLLWVNNHFNDFEGDPVMTQFLEDFEKLLDSSKMKGHLRLLNIACAAKAKCRQI
TLQKPSRESPLFFTIQGGSERCFGIFVETVEPASKAAEAGLKRGDQIMEINGQNFENISH
SKAMDILRNNTHLSLTVKTNIFVFKELQSRVRHEKKNGGPHIPKIQERKSNRFSIPDLPG
DMEFPSDSKNRKKLKANTVSGGRNKIRKMLEKTRFNILPPKPFSDSGLSQSQDDSIVGTK
QCRHSVAIMPIPGSLSSSSPDLLQPAASVLDFSNPSDIPDQVIRVFKADQQSCYIIISKD
TTAKDVVSHVVSEFGLIAASETYSLCEVSVSSEGVIKQRRLPDQLSKLADRIQLNGRYYL
KNNMETETLCSDEDAQELLRESQISLLQLSTVEVAAQLSMRDFGLFRNIESTEYVDDLYK
LDPGGGGGGHLKQFEEIINQETFWVATEILREPNALKRMKTIKHFIKIALHCRECKNFNS
MFAIISGLNLASVARLRSTWEKLPSKYEKLFRDLQDIFDPSRNMAKYRNILSSQSVQPPI
IPLFPVVKKDLTFLHEGNDSSVDGLVNFEKLRMIAKEIRNVVRMTSANMDPALMFRQRSL
SQGSTNSNLLDVQGNHKKRVRRSSLLNAKKLYEDAQMARKVKQYLAHLEVETDEEKFQIM
SLQCEAAYSTLSKNLSERRSTKSDMSPVSMRSGLSSAKPQNRVSQVLQVPPVSLYPLRKK
SLAKDLAASFSPNSPQTPKKAAVAAEDSSVKRSEDASTVSSLHSSPTVSPQGSPRKAGGA
PRQNCGQLNLSGSSSSLASEVGNRAAGGRTYGIGYALMPAGRSDLSDSSEISSRSSIVSN
CSVDSMPTAPTISCPSETPGNTPADCSQPCTSSSSSRQSTVRESSFPLSTSGEELTVPEH
TTEMADSGRGSWTSCSSNSHDNLQTLPGQRAPDLLNHRHTPMGGPIAEVEIGPGLPEDNC
SRDDPELSQSRQSWTSSSSLSDTYEGSCGTIKRKTADHAASDGQHSTDPAYKMITSSTEK
GLIVYCVTSPCKDDRFKAPPPTPPGYQGLSLGDAHVQDGGALRPAHVKPPEYSVALQRCK
LRHSLAEPTLSRPPSVTLHSQTDSEEGMWPIPAELRNTSGSHFTPISKEANDEQVSAV
NT seq 4857 nt   +upstreamnt  +downstreamnt
atgaagttttcatttccggaaatcagagagtttaatatgaattcctcagtggatttatcg
ctgaagaaagcgctgaaaactcctccgacacgacgaactgctgaggacctgaacatcata
tacgctcatctgtaccacatggacgtgctgtcgcacctcagagaacatcagctcaggtcc
atgtgcatgacggccagatatgagcggtatgatgcgaaccacgttctcttctatgctgac
agcatctccacatgctggtacgtcctgctgtcgggctcagtgctggtgaaggagcacatg
tatctggcacgatgctgtttcgggacgcagcgtggaggacgacgaggctgtgaatgcatc
actttagagccgtcagagatgattgtggtggagaacaccagcgagagcgacgatgccgct
ctacagagacacggatctcagcaacagtcgcgccgacgcttccacaaggtgaacgctgga
ggagagcgacaactcatcgtagatgcccaggatgcctcggatacgcttcctggtgacctc
aacaagatgcatctgacggaccacccccaccagcagatgcacatgccgcccagccaatca
ggatgcagcatcgccagtgactcggggagcagcagcctatcagacatctaccaggccaca
gagagcgagatgggtgacgtggatctgtccggcctccccgaagctcctgtggactcagag
gaagaggaggaagatgaagatatcgagcgctcctcagaggctcttctgggcagagatctg
gtgcgagagtgtctggagaaggatgcggtggatcggacagacgacgacatcgagcagctc
ctggagttcatgcatcagctgccggctttcgctaacatgaccatgtctgtcaggagggag
ctgtgtcgagtcatgatgttcgaggtggtggaacaggaagggaccatcattcttcaggac
aaacaggagctggacctgtggtacgtgatcctgaacggcgctgtagagatcagctatgga
gacggccgagcagagatcctgtgcatgggcaacagcttcggcatctcgccgtctctggac
aggcagttcatgaccggggtcgtgtgcactaaagcagatgactgccagtttgtgtgcatc
gcacaagaggactactgccgcatcctcaaccatgtggagaagaacacgcacaaggtggag
gaggagggcgagatcgtcatggtgaaggagcaccgagagctggaccgcagcggcaccagg
aagggccacgtcgtcatcaagggcactccagagcgtctgatcatgcacctggtggaggag
ccgtcagtggtggaccctacttacattgaggacttcctcctgacgtaccgcaccttcctg
tccagccccatggaagtgggcaagaagcttctggaatggttcaaagtggacagtctaaga
gacacggtgacgagaattgtgttgttgtgggtgaacaatcattttaatgattttgaaggc
gatccagtgatgactcaattcctggaagactttgagaagttgctggattcctcgaaaatg
aagggtcaccttcgtctgctgaacattgcgtgcgctgctaaggcgaagtgtcgtcagatc
actctgcagaagccttccagagagtctccgctgttcttcacgattcagggcggcagcgag
cggtgcttcggcatcttcgtcgagaccgtggagccggccagtaaagcagcagaagcgggg
ctcaagcgtggagatcagatcatggagattaatgggcagaacttcgagaacatctcacac
tccaaagccatggatatccttaggaacaacacgcacctctctcttactgtgaagaccaac
atcttcgttttcaaagagcttcaaagccgcgtgaggcacgagaagaagaacggtggtcct
cacatccctaagattcaggagaggaagagcaaccgcttctccatcccggatctgcccgga
gacatggagtttccttcggacagcaagaaccgcaagaagttgaaggccaacactgtgtcc
ggaggacgcaacaagatccgtaagatgctggagaagaccagattcaacatcctgccccca
aaaccctttagcgacagtggcttgtctcagtctcaggatgacagtattgtgggcactaag
cagtgccggcacagcgtggccataatgcccatcccaggcagtctgtcgtccagcagtcct
gacctgctgcagcccgccgccagcgtactggacttcagcaacccctcagacattccagat
caggtgatccgcgtgttcaaagccgaccagcagagctgctatatcatcatcagtaaagac
accacagccaaagatgtcgtctcgcatgttgtcagcgagttcggcctcatcgccgcttcg
gagacctactcgctgtgtgaggtctctgttagttctgaaggggtcatcaaacaacgccgg
ctgccggaccagctctcaaaactagctgaccgcatccaactcaacggcaggtactacctg
aagaacaatatggagacagagacgctctgctccgatgaagacgctcaggagctcttgagg
gagagtcagatcagcctcctgcagctcagcaccgtggaggtggccgcgcagctctccatg
agagacttcggcctgttccggaacatagagtccaccgagtacgtggacgacctgtacaag
ttggacccgggcggtggcggtgggggccatctgaagcagtttgaagagatcatcaaccag
gagactttctgggtggccactgagatcctccgtgagcccaacgcactcaaacgcatgaag
accatcaagcacttcatcaaaatagccctgcactgccgcgagtgcaagaacttcaactcc
atgttcgccatcatcagtggtcttaatctggcttcagtagctcgattgaggagcacgtgg
gagaaattacccagtaagtatgagaaacttttccgcgaccttcaggacatcttcgacccg
tcacgcaacatggccaaataccgcaacatactgagcagccagagcgtgcagcctcccatc
atcccactgtttcctgttgtcaagaaagacctcaccttcctacacgaaggtaatgattcg
agtgttgacggcctggtgaatttcgaaaagttgagaatgatcgccaaggagatccgaaac
gttgtgcgcatgacatcagccaacatggacccggcgctcatgttcagacagaggtctctg
agtcagggcagcactaactcaaacctgctggacgtccagggcaaccacaagaagcgcgtg
cggcgcagctctctgctcaacgccaagaagctgtacgaggacgcccagatggcccgcaag
gtgaagcagtacctggcacacctggaggtggagacggacgaggagaagttccagatcatg
tcgctgcagtgcgaagcggcctacagcacactatcaaagaacctgagcgagcggaggtcc
actaaatcggacatgtccccggtgtccatgcgctccggtctgtcttcagccaagcctcag
aaccgcgtgtctcaggtgctgcaggttcctcccgtcagcctttacccgctgcgcaagaag
agtctcgctaaagacctggccgcttccttcagtcccaactcgccacagacgccgaagaaa
gctgctgttgcggccgaggactcgagcgtcaagagatccgaagacgcgtccaccgtctcg
tccctgcactccagtcctaccgtctccccgcagggatctcctcgtaaagcaggcggagct
cccagacagaactgcggtcagctgaacctgtcgggttcgtcctcgtctctggccagcgag
gtcggcaacagagcggcaggcggccgcacgtacggcataggttacgccctcatgcccgcc
ggcaggtccgacctgtccgactccagcgagatctcttcccgctccagcatcgtcagtaac
tgctctgtggactccatgcccaccgcgcccaccatcagctgcccgtcagagacgcccgga
aacactccagcggactgcagtcagccctgcacgagttcatcatcgtctcgacagtccacg
gtgagggagtccagcttcccgttgtccaccagcggcgaggagctgacggtgcctgagcac
accactgagatggccgacagcggccgcgggagctggacctcctgctctagtaactcccac
gacaacctccagactcttccgggccagcgagcgccggacctgctcaaccatcgccacacg
cccatgggcggcccgatcgccgaggtggagattggcccgggtttgccggaggacaattgc
tccagagacgaccctgagctcagtcagtccagacagagctggacgtcctccagctcgctg
tcagacacctacgagggaagctgcggcaccatcaaacgcaagaccgcagatcacgccgcc
tccgacgggcagcacagcacagatcctgcgtacaagatgatcacgtccagcacggagaaa
ggactcatagtgtactgtgtaacgtcaccctgcaaagacgataggttcaaagcgccgccc
ccgactccgccggggtaccagggcctgagtctgggcgacgcgcacgtgcaggacggagga
gccttgcggccggcccacgtaaagccgcccgagtatagcgtggccttgcagaggtgcaag
ctgcgacacagcctggccgagcccaccttgtcccgaccgcccagtgttactctccattct
cagaccgatagtgaggagggtatgtggccgatccctgcggagctgagaaacacatccggc
tcgcatttcacccccatatctaaagaagcaaatgatgagcaggtttcagccgtgtga

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