Chanodichthys erythropterus (predatory carp): 137012573
Help
Entry
137012573 CDS
T10334
Name
(RefSeq) short transient receptor potential channel 5-like
KO
K04968
transient receptor potential cation channel subfamily C member 5
Organism
cery Chanodichthys erythropterus (predatory carp)
Brite
KEGG Orthology (KO) [BR:
cery00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cery01009
]
137012573
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cery04040
]
137012573
Protein phosphatases and associated proteins [BR:
cery01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
137012573
Ion channels [BR:
cery04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
137012573
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank
Ank_4
Ank_3
Ank_5
PKD_channel
YVC1_C
LHD_TRPY1
Motif
Other DBs
NCBI-GeneID:
137012573
NCBI-ProteinID:
XP_067231996
LinkDB
All DBs
Position
22:complement(3543130..3579633)
Genome browser
AA seq
1019 aa
AA seq
DB search
MAQLYYNKASNSPYRDRIPLQIVRAEVELSAKERAYLTAVEKGDYAGVKLALEEAEIYYN
INVNCLDPLGRSALLIAIENENLEVMELLLSHGVLMGDALLYAIRKEVVGAVELLLSYRK
PSGEKQVPSLMMDTQFSEFTPDITPIMLAAHTNNYEIIKLLVQRKVTIPRPHQIRCDCVE
CVSSSEVDSLRHSRSRLNIYKTLASPSLIALSSEDPILTAFRLGWELKELSKVENEFRQE
YEELSQQCKLFAKDLLDQARSSRELETILNHRDDHSEELDPRECRDLAKLKLAIKYHQKE
FVAQPNCQQLLATLWYDGFPGWRRRHWAVKLVTCFIIGLLFPVFSLIYLLAPKSTLGTFI
KKPFIKFICHTASYLTFLLLLLLASQHIVQTDLHVQGPPPTIVEWLILPWVLGFIWAEIK
EMWDGGFTEYIHDWWNLMDFAMNSLYLATISLKMVAYFKYNSSRPRVEWEMWHPTLIAEA
LFAIANIFSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLNQLYF
YYETKASEEPNHCKGIRCEKQNNAFSTLFETLQSLFWSVFGLLNLYVTNVKARHEFTEFV
GATMFGTYNVISLVVLLNMLIAMMNNSYQLIADHADIEWKFARTKLWMSYFDEGGTLPPP
FNIIPSPKSVWYLCVWLHCRLCGHGEPGQECKHGNLKEFTERHADNLIQNQHYQEVIRNL
VKRYVAAMIRSAKTDEGLTEENFKELKQDISSFRYEVLDLLGNRKPPRRTYSSSSEATQQ
DETAEPEEDEEADGLGGHRCGDGGESSRSKASTSFSQCYRSNRESQFSVSALFKSMSGPA
KERLESNGLRKSISHPAAFVRTSSRMLHFSRSKKNSLQRLGTLMSRMNGHIPDPHVETPG
VQQSAYSVSNRVPQTSWQDPQMLSKVTQSEMHLHTLGSGPSETEHNPMQATSQRANGRDS
LLLRPPSHSLPPLHCASRLTASSAQLLASSDDLCHGWMGPCDSLGSSSWEQEESVTTQL
NT seq
3060 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagctgtactacaacaaggccagtaactccccgtaccgcgatcgcatccccctg
cagattgtgagggcggaggtcgagctgtctgccaaggaacgagcctacctgacggcggtg
gagaagggcgactatgctggagttaaactggcccttgaggaggccgagatctattacaac
atcaacgtgaactgcctggacccgttgggccgcagcgcactcctcattgctattgagaat
gagaacctggaggtgatggagctgctgttgagtcatggcgtgctcatgggcgacgctctc
ctctacgccatccgcaaggaagtggtgggagcagtggagttactgctgtcctacaggaag
cccagtggcgagaaacaggttccttctctcatgatggacacacagttttcggagtttaca
cccgatatcacaccaatcatgttggctgcccacactaacaactatgagataatcaagctc
ctagttcaacgaaaagtcaccataccgcggccacaccagatccgttgtgactgcgtggaa
tgtgtatccagctccgaagttgacagcctgcggcactcccgttcacgccttaacatctac
aaaactcttgccagcccctctctcatcgccctttccagcgaagatcccatcctcacagca
ttcaggctgggctgggagctgaaggagctcagtaaggtggagaatgagttcaggcaggag
tacgaggagctatcgcagcagtgcaaacttttcgcgaaagacttgctggatcaggcccgt
agctcccgtgagctggagaccatcctcaaccatcgggatgaccacagcgaggagctggat
ccccgtgaatgcagagacctggccaagctcaagctagccatcaagtaccaccaaaaagag
tttgtagctcagcccaactgccagcagctcctggcaacactgtggtatgatggtttcccg
ggttggagacgtcgtcactgggcagtgaagctcgtcacttgcttcatcattggcctgctc
ttccctgtcttctccctcatataccttctggctccaaagagcactcttggaaccttcatc
aagaaaccattcatcaagttcatctgccacactgcctcctacctgaccttcctcttgctc
ctcctcctcgcctcacagcatatcgtgcaaacggacctgcatgtacagggacctccaccc
accattgtggagtggctgatcttaccctgggttctaggctttatctgggcagagattaaa
gagatgtgggatggaggtttcacagagtacatccatgactggtggaacctgatggatttt
gcaatgaactccctctacctggccaccatatctcttaaaatggtggcctattttaagtac
aatagctctcgtcctcgtgtggagtgggagatgtggcaccctacgctcatcgcagaggct
ctcttcgctatcgccaacatcttcagctcgctgcgtctcatctctctgttcactgccaac
tctcacttgggcccactgcagatttctctcggccgcatgctgttggacatcctcaagttc
cttttcatctactgtctggtgctgctggcttttgccaacggcctcaaccagctctatttc
tactatgagacgaaggcgtccgaagagcccaaccactgcaaagggatccgttgtgagaag
cagaacaatgccttctccacgctgtttgagactcttcagtctcttttctggtctgtgttc
gggctgttgaatctgtacgtcaccaatgtgaaggctcgtcatgagttcaccgagtttgta
ggggccaccatgttcggcacttacaacgttatctcactggtggtgctactgaacatgctc
atcgctatgatgaacaattcttaccagcttattgctgatcacgcggacattgagtggaag
tttgctcgtacaaagctgtggatgagctactttgatgagggagggacgttaccgccaccc
ttcaacatcatacctagtccaaagtctgtgtggtacctgtgtgtgtggctgcactgccgt
ctgtgtggacatggagagccagggcaagagtgtaaacatggaaacctcaaagagttcacg
gaaaggcatgcagataacctcattcagaaccagcactaccaggaggtgatcagaaacttg
gtaaagcgatacgttgcagccatgatccgcagcgccaaaacagacgaagggctgacagag
gagaacttcaaggaactgaagcaggacatctccagtttccgctacgaggttcttgacctg
ctgggaaaccgaaaaccaccacgccgcacatattcttccagtagtgaggccactcagcag
gacgaaacagctgagcctgaggaagatgaggaggcagatgggcttggaggacaccgatgt
ggggatgggggagagtcatccagatccaaagcatctacgtccttttcccaatgttacagg
agtaaccgagagtcccagttcagcgtatcagccctgttcaagtccatgtcgggaccggcc
aaagaaagactggagagcaatggcttgagaaagagcatatcccaccctgctgcatttgtg
cggaccagcagccgcatgctgcacttttcacgctccaagaaaaactctttgcaacgtttg
ggaacgctaatgtcgcgtatgaacggacacatcccggatccgcatgtggagaccccggga
gttcagcagtctgcatacagcgtctcaaacagagtaccgcaaacatcttggcaagacccc
cagatgctgtcgaaggtaacacagagcgagatgcacctgcacacgctgggatcgggaccc
tctgagactgaacataacccaatgcaggccacatctcaacgggcgaacggcagggacagt
ctcctcctccggccacccagccactcgctgcccccgctgcactgtgcttccagattgacc
gcctccagtgcccagctcttggcctccagtgatgacctgtgccatggctggatgggaccc
tgtgacagtttaggctcctccagctgggaacaagaggagtctgttacgacacagctgtag
DBGET
integrated database retrieval system
