Chanodichthys erythropterus (predatory carp): 137014942
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Entry
137014942 CDS
T10334
Symbol
tdg.2
Name
(RefSeq) G/T mismatch-specific thymine DNA glycosylase isoform X1
KO
K20813
thymine-DNA glycosylase [EC:
3.2.2.29
]
Organism
cery Chanodichthys erythropterus (predatory carp)
Pathway
cery03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cery00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
137014942 (tdg.2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cery03400
]
137014942 (tdg.2)
Enzymes [BR:
cery01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.29 thymine-DNA glycosylase
137014942 (tdg.2)
DNA repair and recombination proteins [BR:
cery03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
137014942 (tdg.2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-GeneID:
137014942
NCBI-ProteinID:
XP_067235611
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Position
24:14393502..14398869
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AA seq
440 aa
AA seq
DB search
MAVRPPIKMEERQYSSLTAPMDYLQYWYQTSPQQYQPEQVPHYHQMVNAAQFAERPMEDK
IMTDLSVHQDPYLDQPQQHHQDSYLDQPHQDPYLDQPQQHHQDPYLDQPQQPQQPSVQQP
ALPTTPAKGKKRGRPLKSEVKEKTDAEENAKKAKRTLDRFNGMSVEEVMARKLPDVITHN
LDMLIIGINPGLLSAFKGRHYPNPGNHFWKCLFLSGLTEEQLNHMHDQTLPERYGIGFTN
MVERTTPGSKDLSNKEIREGGHQLLEKLQKYRPLIAVFNGKCIYETFCKEIFGVKAKNLE
FGLQPYKVPETETVCYLMPSSSPRCAQFPRAQDKVHFYIKLKELRDQLKGVVKAPEIQET
NYTFDVTLAKEDAKRLAIKEEQHDPEYEETCAHGSWGEPQQAFGVHPSTDTDQVTDNRWT
MQPFADQIPDIRCSNNNRTT
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atggcagtaagaccaccaattaagatggaagaaaggcagtattcatctctgacggcccct
atggattatcttcagtactggtatcaaaccagtccccagcagtaccagccggagcaggtg
ccgcactaccaccagatggttaatgccgcccagttcgctgagagacccatggaggacaaa
atcatgactgatttatcagtgcatcaagatccatatctggatcaacctcaacagcatcac
caagattcatatctggatcagccacatcaagatccatatctggatcaacctcaacagcat
catcaagatccatatctggatcaacctcaacagcctcaacaaccctctgtccaacaacct
gcccttccgacaactccagcaaaaggcaagaaaaggggaaggcctctaaaaagcgaagta
aaggaaaagacggatgctgaagagaatgccaagaaagcaaagaggacgttagatcggttc
aacggcatgtcagtggaggaagtcatggctagaaagctgccagacgtcatcacacataat
cttgacatgctgattatcggcatcaatcctggactgttgtcagccttcaagggaaggcat
tatccaaatcctgggaaccatttttggaagtgcttgtttctctccgggctgactgaagaa
cagctgaaccacatgcatgaccagacactacctgaacggtatggcattggtttcaccaat
atggtggagaggaccacacctgggagtaaagatctgtcaaacaaagagatccgtgaaggt
ggacaccagcttttggaaaagctccagaagtacagacctttaattgctgtgttcaatgga
aaatgtatttatgaaacattttgcaaggagatttttggagtgaaggccaagaacttagag
ttcggattgcagccctacaaagtgccagaaacggaaacggtttgctatctgatgccatcg
tcaagcccacgctgtgcccagtttcctcgtgctcaggacaaagtgcacttctacatcaag
ctaaaagagctcagggatcagctgaaaggagtggtgaaggctccggagatccaagagaca
aactatacatttgatgtgactctggccaaagaggatgccaaaagactggcaatcaaagaa
gagcagcatgaccccgagtacgaggagacctgtgcacatggatcatggggggaaccacaa
caagcgttcggggtccatccttctacagatacagaccaggtaacggacaaccggtggaca
atgcagccatttgcagaccagattccagacatcagatgtagcaacaacaaccgaaccacc
tga
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