Chanodichthys erythropterus (predatory carp): 137017768
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Entry
137017768 CDS
T10334
Symbol
smcr8a
Name
(RefSeq) guanine nucleotide exchange protein smcr8a
KO
K23611
guanine nucleotide exchange protein SMCR8
Organism
cery Chanodichthys erythropterus (predatory carp)
Pathway
cery04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
cery00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
137017768 (smcr8a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cery04131
]
137017768 (smcr8a)
Membrane trafficking [BR:
cery04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
137017768 (smcr8a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMCR8_C
Folliculin
DUF2018
ERM_helical
Motif
Other DBs
NCBI-GeneID:
137017768
NCBI-ProteinID:
XP_067238488
LinkDB
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Position
3
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AA seq
857 aa
AA seq
DB search
MIGSPDVVAFTKEDDFGDSFLDPLSLPEEFSVPLFTHTANANPWTKTSFAKFSKDFILIS
EFSEQVGPQPLLTIPNDPKVCGTFDLNYFSLRIMSVDYQASFVGHPPGSNYPKLNFVEDS
KVVLGDSKEGAFAYVHHLTLYDLEARGFVRPFCMAYISADERKIMQQFQELSSEFSKASE
ILKSGNRKAFANELEKKLKDLEYTRLVLHKEEEQQKMNNGCYSTQAIEKANELANMEKSI
YEHKDLLRQITSYPSRKKRGMDFVQCEADTSVSDDAQNSNNSKTADKTVESESDSRKPSY
TPQLIKAKSAKCFDKRLKTLEELCDTSYFHQTLEQLNVIEKSFRGDLCSIYTSQIDRALL
SKQRVTSFLFESECDWEDEGTSKNFNITSNNPTIPILNLSGEPLSLDSYTTCIDVDHTKP
GVESVEGPPESSTSDITQETSEAADTETKGSLSSDKSIEALGGVSPSSLHYFDGLERKCK
VSVASSFENTSHSIAVPRWSSDGNLVPMDAACCIGQDGFVFEEPLPELAEECCGDTVVNQ
EPLSLFQGDPALQVNYILEESALAESPNTMGLTFSDLNTCVLSEDVAKINIEDASDSTSF
MSASTSSDRAVSPFTYGSALTLKQKKKAGHSALRFIRQYPFAQQAIFCLLSGRTLVILGV
DESTVRKLVNALFVFVPNLGKYGETIQPWLTTPFQLTDLQRWKLIGLQRAASPTGSSILH
SLNRYSRYIGILDCDNKTLRCPPYRGTLISHLADHRTQIKRGSTYFLHVQGMLTQLTAKA
FLYTFCHHIHLPMDINDQGSVTSRRTNFLLQLGYTVEESKIVQYLSELIKQHYIQGSSKW
VNQSFCFNYSTSYLYKI
NT seq
2574 nt
NT seq
+upstream
nt +downstream
nt
atgattggctcaccagatgtggtggcttttaccaaagaagatgactttggggactcgttc
ttggatccactgtcacttccagaggagttttctgtgcctttgtttactcatactgccaat
gcaaatccatggacgaagacatcctttgcgaaattctcgaaagatttcatactcatctct
gagttttcggagcaggttggtccacagcctttgctcaccattcccaatgaccccaaagtg
tgcgggacatttgaccttaactacttctcgctgcgcatcatgtctgtggactaccaggca
tcttttgtcggacatcctcctggcagtaactatccaaagctcaattttgtggaggactca
aaagtcgtcctgggtgattccaaggaaggagcttttgcctacgtccatcatctgacgctg
tacgacttggaggctcgtggattcgtacggcccttttgcatggcctacatttccgcagac
gaaaggaagatcatgcagcagttccaagaactatcatccgagttttccaaggcatcagaa
attctcaaatcaggaaacaggaaagcttttgcaaatgaactggaaaagaaactgaaagac
ttggagtacaccagattggtgctgcacaaagaggaggagcagcagaaaatgaacaatggc
tgttattccacacaagctattgagaaggcgaatgaactagcaaatatggagaagtctatc
tatgaacacaaagatctactgaggcaaatcacatcttatccttcgagaaaaaagagaggt
atggattttgtacagtgcgaggctgacacaagtgtatcagatgatgcacaaaatagtaat
aattccaaaactgcagataagactgtggaatccgaaagcgatagcagaaagccctcttac
acgcctcagctcatcaaggccaaatctgcaaagtgctttgataaacgcttgaaaacatta
gaagagctctgcgataccagctatttccaccaaactctagagcagctaaatgtaatcgag
aagtcattccgaggagatctgtgctctatttataccagccagattgacagggctcttctg
agcaaacagagagttactagttttctctttgaatccgaatgtgactgggaggacgaagga
acctcaaagaacttcaatatcacttccaacaacccaacgatccccattctgaacttatcc
ggtgagccgctgagtcttgactcctacaccacctgcatagatgtagatcacactaagcca
ggcgtggagtctgtggaagggcctcctgaatccagtacatctgacatcacgcaggaaacc
tcagaggccgccgacacggagaccaaagggagtttaagtagcgacaagagcatcgaggct
cttggaggtgttagtccttccagtctacattactttgatggccttgaaagaaagtgcaag
gtatccgttgcgtcctcatttgaaaatacgtcccattctattgcagtcccacgttggtca
tccgatgggaatctagtcccgatggatgcagcttgctgtattggacaggatggttttgtt
tttgaggaacctttacctgagctcgccgaggagtgttgtggcgacactgttgtgaaccaa
gaacctctgtctctttttcaaggagatcctgccttacaggtaaactacatcctcgaagag
tcagccctcgcagagagccccaacaccatgggactgactttttccgatctaaacacttgt
gttctctcagaggatgtggcaaaaattaatatcgaagatgcctctgatagtacaagcttc
atgagcgcctccaccagttctgaccgagcggtgtctccattcacttatggcagtgcgttg
acgctaaagcagaaaaagaaagctggtcacagcgctcttcgattcatcaggcaatatcca
tttgctcagcaagccattttctgccttctgagtggccgaacgcttgttattttgggggtg
gacgagagcaccgtgaggaagctggtcaacgccctgttcgtttttgtgcccaatctcggc
aagtatggtgaaaccatccaaccgtggcttacgacaccatttcagctgacagacttgcag
agatggaaacttattggattgcagagagctgcctccccgactggatccagcatcctccac
tctttgaatcgatacagccgttacattggcattttggattgtgacaacaagaccctccgg
tgtccaccgtacagaggaacactaataagccatttggcggaccacaggactcagatcaaa
cgtggcagcacctacttcctccatgttcagggtatgttgactcagcttacagccaaggcc
ttcctttacacattctgccatcacattcaccttcccatggacatcaacgaccagggctcg
gtaacatcacgcaggactaatttcttgttgcagctcggctacactgtggaggagagtaaa
atcgtccagtacttgagtgagctcatcaagcagcattacattcagggctcctccaagtgg
gtcaaccagtctttttgttttaattactccaccagctatttgtacaaaatctga
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