Chanodichthys erythropterus (predatory carp): 137019945
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Entry
137019945 CDS
T10334
Symbol
c9orf72
Name
(RefSeq) guanine nucleotide exchange factor C9orf72 homolog
KO
K23609
guanine nucleotide exchange protein C9orf72
Organism
cery Chanodichthys erythropterus (predatory carp)
Pathway
cery04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
cery00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
137019945 (c9orf72)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cery04131
]
137019945 (c9orf72)
Membrane trafficking [BR:
cery04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
137019945 (c9orf72)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C9orf72-like
DUF7645
Motif
Other DBs
NCBI-GeneID:
137019945
NCBI-ProteinID:
XP_067241190
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All DBs
Position
5:5575781..5586136
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AA seq
462 aa
AA seq
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MSAACPPQSPAVAKTEVLVEDWCPVLAATFAYWDNILGPRVRHIWAPKGQGLSLLSDGEV
TFLANHTLNGEILRNAESGAVDVKFFVLAEKGVIIVSLIFDGELKGDKNTCALSIILPQS
ELSFYLPLHSVCVERLKHIIRKGRICMQKGYNIISMLSSEIVPIMELLTSMKKHSVPEEV
DLKDTVLNDDDIGDSCHEDFLHKAISSHLQTCGCSMVVGSNPEKVNKIVLTLCLFLTPAE
RKCSRLCHPDGSFKYDTGLFVQGLLKDSTGSFVLPYRQVLYSPYPTTHIDVDINTVKQMP
PCHEHTYHQRRYMRSELSALWKAASEDDISSDNLINAQDSFTPDLNIFQDVMHKDTLVKS
FIDEVFLLKPGLSLRSVYLSHFLLLLHRKALTLLRYIEDDTQKGKKPFRSLRNLKTDLDL
TMEGDLNIIMAMAEKLRAGLHSFVFGKSFLTSVQERDLLMSF
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcagcctgtcccccgcagtctccagctgtggctaagactgaagtgctggttgag
gactggtgtcccgtgctggctgcgaccttcgcttactgggacaacatcctgggacctcgt
gtacgccacatctgggcgcccaaaggtcaggggttgtcgctgctcagtgatggagaggtc
acgtttctggccaatcacacgctgaacggcgagattttgcgaaatgcggagagcggtgca
gtggatgtgaaattcttcgtcttggcggaaaagggagtcatcatcgtctcactgattttt
gatggagaactcaagggtgataagaacacttgcgctctgtcaatcatcctgccacagtca
gagctcagtttctacctgccactgcacagcgtgtgtgtggagcgactcaagcacattatc
cgcaagggacgcatctgcatgcagaagggttacaacataatctctatgttgtcatctgag
attgttcccataatggagcttctcacttccatgaagaaacacagtgtaccagaggaggtg
gatctaaaggacactgtgctcaacgatgatgatattggagacagctgtcatgaagacttt
ttgcacaaggctatcagctctcatcttcagacgtgtggctgctccatggtggttggcagc
aatcctgagaaagtcaataagatcgtgctcacgctgtgtctcttcctcactcctgcggag
agaaagtgctctcgactctgtcaccccgatggctcgtttaaatatgacaccggtctcttt
gttcagggcctccttaaggactccactggcagctttgtgttaccctaccggcaggtgctc
tactccccgtaccccaccacccacatcgacgtggacattaacacagtgaagcagatgcca
ccctgccacgagcacacgtatcatcagcggcgctacatgcgctcggagctcagtgccctt
tggaaggccgccagcgaggatgacatcagttcagacaacctcatcaatgcccaggactcc
ttcaccccagacttgaatatatttcaggacgtgatgcacaaagacacacttgtgaagtcc
ttcatagatgaggtgtttctgttgaagccaggtctgtctctgcggagtgtgtatttatcc
cacttccttctcctgctgcacaggaaggccctgacactgctccgatatattgaggatgat
acgcagaaggggaagaaacctttcagatctctacgcaatctgaaaactgatttagactta
acaatggagggggatttgaatatcatcatggcgatggcagagaagctgcgggcaggcctt
cactccttcgtttttgggaagtctttccttaccagcgtgcaggagcgtgacctgctcatg
agcttctga
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