Chanodichthys erythropterus (predatory carp): 137026362
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Entry
137026362 CDS
T10334
Symbol
cacna1fb
Name
(RefSeq) calcium channel, voltage-dependent, L type, alpha 1F subunit
KO
K04853
voltage-dependent calcium channel L type alpha-1F
Organism
cery Chanodichthys erythropterus (predatory carp)
Pathway
cery04010
MAPK signaling pathway
cery04020
Calcium signaling pathway
cery04260
Cardiac muscle contraction
cery04261
Adrenergic signaling in cardiomyocytes
cery04270
Vascular smooth muscle contraction
cery04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
cery00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
137026362 (cacna1fb)
04020 Calcium signaling pathway
137026362 (cacna1fb)
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
137026362 (cacna1fb)
09153 Circulatory system
04260 Cardiac muscle contraction
137026362 (cacna1fb)
04261 Adrenergic signaling in cardiomyocytes
137026362 (cacna1fb)
04270 Vascular smooth muscle contraction
137026362 (cacna1fb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cery04040
]
137026362 (cacna1fb)
Ion channels [BR:
cery04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
137026362 (cacna1fb)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
CAC1F_C
Ca_chan_IQ
GPHH
PKD_channel
Motif
Other DBs
NCBI-GeneID:
137026362
NCBI-ProteinID:
XP_067249773
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All DBs
Position
9:16551899..16602730
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AA seq
2069 aa
AA seq
DB search
MYEENRKRNGYSNEEEEGGGEAEEEEEEEGGGGEEGDEGDEEEKDEWEENGRPKMNRTET
LNSTCSSTGTQKKKSQHMKKQVQGSNQVQRAPRALFCLKLNNPIRRAALHLVEWKPFDIF
ILLAIFANCVALGVSKPFPEDDSNATNHDLEQVEYVFLIIFTIETFLKILAYGLVMHPSS
YIRNGWNLLDFVIVIVGLFSVVLETVTHKSGETTSHMPSKPGGLDVKALRAFRVLRPLRL
VSGVPSLQIVLNSIMKAMVPLLHISLLVLFVIIIYAIIGLELFLGRMHRTCYFIGTDNYA
DDDPLPCAFAGHGRQCVINGSECRGKWDGPNGGITNFDNFFFAMLTVFQCITMEGWTDVL
YWMNDAIGFELPWVYFVSLVIFGSFFVLNLVLGVLSGEFSKEREKAKARGDFQKLREKQQ
MEEDLSGYMDWITQAEDIDEFDEDGNRRVTLRDLADKKRGKFGWFSHSNETHASLPASET
GSENTENIDEEHTDCCAACCARIMKIPCCRALRRWNRCIRRNCRTAVKSVTFYWLVLILV
FLNTALSASEHYNQPDWLTDVQDIANKVLLSLFTVEMLLKMYSLGLQGYFVAFFNRFDCF
VVCGGILETVLVELEIMPPLGISVLRCVRLLRIFKVTRHWTALSNLVASLLNSMKSIASL
LLLLFLFLIIFALLGMQLFGGKFNFDETQTKRSTFDAFPQALLTCFQILTGEDWNVVMYD
GIMAYGGPVFPGMIVCLYFVILFICGNYILLNVFLAIAVDNLAGGDGDNKKNEEKKEVEG
EQAEGEGENGEVKVDVDDEYEEEEEEPEEGDDEEGKTQLNVADFAPPKEKILPIPEGSAF
FCLSKTNPIRVGCHTLIHHHIFTNLILLFIILSSISLAAEDPIRAHSFRNNLLGYADYAF
TSIFTVEILLKMTVHGAFLHQGSFCRNWFNLLDLLVVTVSLVSFFLHSSAISVVKILRVL
RVLRPLRAINRAKGLKHVVQCVFVAIRTIGNIMIVTTLLQFMFACIGVQLFKGKFYRCTD
EAKNTPEQCKGTFVVYKDGDVSHPMVRERLWLNSDFNFDNVLMGMMALFTVSTFEGWPAL
LYKAIDANAENHGPIYNYRVEISIFFIIYIIIIAFFMMNIFVGFVIITFREQGEAEFKNC
ELDKNQRQCVEYALKAQPLKLYIPKNPVQYKFWSIINSTGFEYIMFVLILLNTVTLAVQH
YEQSKLFSHVMDILNMVFTGLFTVEMIIKLMALRLRHYFIDAWNSFDALIVVGSVVDIVV
TEFSSSEDSSRVSITFFRLFRVMRLVKLLSKGEGIRTLLWTFVKSLQALPYVALLIAMIF
FIYAVIGMQTFGKIAMQDHTQINRNNNFQTFPQAVLLLFRCATGEAWQEIMLASLPGKRC
DPESDYEPGEEFTCGSNIAIVYFISFFMLCAFLIINLFVAVIMDNFDYLTRDWSILGPHH
LDEFKRIWSEYDPEAKGRIKHLDVVALLRRIQPPLGFGKLCPHRVACKRLVAMNMPLNSD
GTVTFNATLFALVRTALKIKTEGNPDQENEELRIIIKKIWKRTKPKILDEVIPPPADEEV
TVGKFYATFLIQDYFRKFRKRKEKVGLGDSENGNPSALQAGLRTLQDLGPEMRLALNEDL
EEEEDGLEEELEEDDAHYKNENGYAGHTEPSSRSRRSSLATTPGVAPVPVSGDGILNGGL
GRRSSVAKTQNGNGALEHENFRRRDSTRSSLHYQHKNGVIDQLPKRPSYYKYPRRDSRDR
FSSPLSRREEGGEYPGEQRFYGKDEDSESVISRERHGYPEDSTMFTGHRDMYDGHSVRHP
IYGNHYGNSYEEGRRTARRRLLPATPTGRKTSFNIQCLRRQGSSDDLPIPGTYHQNSPPC
RVRSQGYGSYDSRRSSARSSTGSTASWANTGPRRGRLLYAPLILVEEEGATGAGSVGIWD
KKASSVGVPASVRHPNSGWYSGPSAGGGGQPYRAYTTLRVPTQLSPHYSEKRGSADSLVE
AVLISEGLGLYAKDPKFVAFAKREIADACHMTIDEMESAASDLLSRGGSGESQGFLNHAD
MGPTYSDEEPIRSHEEEELADEMTCVTSF
NT seq
6210 nt
NT seq
+upstream
nt +downstream
nt
atgtatgaggagaaccgaaaaaggaatgggtactccaacgaggaagaggaggggggtggc
gaagcggaagaggaggaggaggaggaggggggtggaggagaagagggtgatgagggtgac
gaggaagagaaggacgaatgggaggagaacggacggccgaagatgaatcgcacggaaacg
cttaactccacctgcagctccactggaacgcaaaagaagaagagtcagcatatgaagaag
caggtccagggctccaaccaggtccaacgtgcccccagagctcttttctgccttaaactg
aacaaccccatccgcagggccgccctccaccttgtggagtggaaaccatttgatatcttt
attctccttgctatcttcgctaactgtgttgctttgggggtctccaagccttttcctgaa
gatgattcgaatgccacaaaccatgacctagaacaagttgaatatgtgtttctgataatc
ttcaccatcgagacgtttctgaagatcctggcatatggcctcgtcatgcacccgagctcc
tacatccgcaatggctggaatttactggactttgtcatcgtcatcgtagggttgttcagt
gtggtgttagagactgttactcataagtctggtgaaacaacttcacacatgccgagtaaa
cctggaggtctggatgtcaaagccctccgagccttcagagtcctacgacccctcagactg
gtttcaggagtgcccagcctgcagattgtgttaaactccatcatgaaggcaatggttccc
ctgttgcacatctctctgcttgtcctctttgtcatcatcatttacgccatcatcggactg
gagctcttcctcggacgaatgcatcgcacctgctattttataggcacagataattatgcg
gacgatgatccactcccatgtgcatttgcgggtcacggacgccagtgcgttatcaatggc
tctgagtgcaggggaaagtgggatggacctaacggcggcatcactaactttgataacttc
ttctttgccatgttaacagtttttcagtgtatcacaatggagggctggacagacgtcctg
tactggatgaatgatgcaattgggtttgagctgccatgggtttactttgtcagcctggtc
atctttggatccttctttgttctaaaccttgtgttgggtgtgttgagtggagaattctct
aaggagagagagaaggcgaaagctcgcggagattttcagaagctccgtgagaagcagcag
atggaggaggatctgtctggatatatggactggatcactcaggctgaggacatagatgag
tttgacgaagacgggaacagacgtgtgaccttgcgtgacctagctgataagaagaggggg
aaattcggctggttcagccactcaaacgaaacccatgcaagtcttccagccagtgaaaca
ggttccgagaacactgaaaacatagatgaggaacacacagattgttgtgctgcttgctgt
gctcgcattatgaagatcccttgctgtcgtgcccttcgccgctggaaccgttgtattcgg
agaaactgtcgtacagcagtgaaatctgtgacattctattggttggtgctgatcctggtc
ttcctcaacacagctctcagtgcctcagaacattataaccaaccagactggctcactgat
gttcaggacattgccaataaggttctcctgtcattgttcacagtggagatgttgctgaaa
atgtacagtctggggttgcagggatattttgtggcatttttcaaccgttttgactgtttc
gttgtgtgcggtgggattctggagacagttcttgtggagttggagatcatgccacctctt
ggcatctcagtgttgcgctgcgtccgcctgcttcggatcttcaaagtcacacgccattgg
acggctctgtccaatctggtggcctcgctactgaattcaatgaagtccattgcctccctg
ctgctgttgctcttcctcttcctcatcatcttcgctctgcttggcatgcagctattcgga
gggaagttcaacttcgatgagacacagaccaaaaggagcacctttgatgccttccctcag
gccctgctcacctgctttcagatattaacaggtgaagactggaatgtagttatgtatgat
ggtatcatggcttatggtggcccggttttccctggaatgatcgtctgtctttactttgtg
attttgttcatctgtggtaactatatcttgctgaatgtcttcttggccatcgctgtcgac
aacttagcaggaggcgatggagataataagaagaatgaagaaaaaaaagaggttgaggga
gaacaggctgaaggtgaaggagagaatggagaggtgaaggtggacgtggatgatgaatac
gaggaggaagaggaggagccagaggagggagatgatgaagaaggcaaaactcagctcaat
gttgctgactttgctcctcctaaagagaaaattctaccaatcccagagggcagcgcgttc
ttctgcctcagcaagaccaacccgataagagtgggctgccataccctgatccatcaccac
atcttcactaatctcatcctgcttttcatcattctcagcagcatttctctggctgcggag
gatcctatcagagctcactccttcaggaacaatcttctgggttatgctgattatgcattt
acttccatattcactgtggagatcttactgaagatgacagtacatggcgcattcctccat
cagggttccttctgtagaaactggtttaatctgttggatcttttggtggtcactgtgtct
ctggtctccttcttcttacattcgagtgccatctctgtagtgaagatcctaagggtgctc
agagtactgaggcctcttcgagcgatcaacagagccaaaggactcaagcatgtggtacaa
tgtgtgtttgtggctataaggaccatcgggaacatcatgatcgtcaccactctacttcag
ttcatgtttgcctgcattggtgttcagcttttcaagggtaaattttatcgttgcacagat
gaagctaaaaacactccagaacagtgcaagggaacatttgtggtgtataaagacggagat
gtgagtcatccaatggtgagagagaggctctggctcaacagtgacttcaactttgataat
gtactgatgggaatgatggccctgttcacagtctccactttcgagggctggccagcgctg
ctctacaaagccattgatgccaatgcagagaatcacggacccatttacaactaccgcgtg
gagatctctatattcttcatcatctacatcatcatcatcgccttcttcatgatgaacatc
ttcgtgggttttgtcatcatcactttccgtgagcagggagaggccgagttcaagaactgc
gagctggacaaaaatcagagacagtgtgtggaatacgccctaaaagcccagccgttgaag
ttgtacatccccaaaaacccagtgcagtacaagttctggtctataatcaactccacaggg
tttgagtacatcatgtttgtgctgattctcctcaacactgttactctggctgtgcagcac
tatgaacagtcaaagctctttagtcacgtgatggacatcctcaatatggttttcactggc
cttttcactgtggagatgatcattaaactgatggctctcagactcaggcattactttatt
gacgcatggaattcctttgatgctctgattgttgtgggaagtgtggtggacattgtggtt
acagagttcagtagctcagaggacagttcccgtgtatccattactttcttccgcctgttt
cgggtaatgcgattggttaagctactcagcaagggagagggcattcgtaccctgctttgg
acttttgtgaaatcactccaggctctgccgtatgttgctcttctgatcgccatgatcttc
ttcatctatgctgtgattggaatgcagacatttggaaagatcgccatgcaggaccacacg
caaatcaacaggaataacaattttcagacctttccgcaggctgtgctgcttctattcagg
tgtgcaacgggtgaagcgtggcaggagatcatgttggccagtcttccagggaagcgctgt
gaccctgagtcagactatgagcccggtgaagaattcacctgtggaagcaacattgccatt
gtctacttcatcagtttctttatgctctgcgccttcttgattattaatctttttgttgcc
gtcattatggacaatttcgactatttgacccgtgattggtcaattcttggaccacatcac
ctggatgagttcaaaagaatctggtcagagtatgaccctgaagccaagggtcgtattaag
cacttggatgtagtggctttgctcaggaggatccagccgccacttggatttgggaaactc
tgtcctcatcgtgtggcctgcaagaggctggttgccatgaacatgcctctgaacagtgat
ggtacagtgaccttcaacgccaccctgttcgccctggtcagaactgccctgaaaatcaaa
actgaggggaaccctgatcaagagaatgaagagttgagaatcatcattaagaagatctgg
aagagaacaaaacccaaaatcctggatgaggttattcctccccctgctgatgaggaagtg
actgtgggtaaattctatgctacgttcctgatccaagactatttcaggaagttccgtaaa
aggaaggagaaagtaggtctgggagattcagagaatggtaacccttcagctctacaggca
gggctgcgaactctgcaggacctagggccagaaatgagactggccttgaacgaagatctg
gaggaggaagaggacggtttggaggaggagctagaggaggatgatgctcattataagaat
gaaaatggctatgcgggccacactgagccttcaagcagaagccggcgctcctctttggcc
actactcccggcgttgctcctgttcctgtctcaggagatggcattttgaatgggggactg
ggacgtaggagctctgttgcaaaaacacagaatgggaacggtgctctggagcatgagaac
ttcaggagaagagacagcacgcgttcctcccttcattaccaacacaagaatggtgtgatt
gaccagctgcccaagaggccatcatactacaaatacccaaggagggactccagagacagg
ttctcttctccgctgtctcggagagaggaaggcggtgagtaccctggagagcagcgcttc
tatggaaaagacgaggacagcgagagtgtcatctctagagaaaggcatggttatccagag
gacagcacaatgttcactggacatagagacatgtatgatggccactctgtgagacacccg
atctacggtaatcattatggaaacagttatgaagaaggcaggaggacagcacggagacgc
ctgctgccagcaacacctactgggagaaagacttcatttaacatacagtgtttaagaagg
caaggtagcagcgatgatctgcccatcccaggaacgtaccatcagaactctccaccctgc
agagtgcgttcacagggatacggcagttacgattctcgtcgcagcagcgcaagatcgtcc
acaggttcaacagcatcctgggcgaacaccggccctcgacggggtcgtctcctctacgct
ccccttatcttggtagaggaggagggagcaacaggggctggtagtgtgggcatctgggac
aaaaaggctagttccgttggagtgcctgcgtcggttcggcatcccaattcgggatggtac
tctggaccctctgctggtggagggggacagccgtatagagcctacaccacccttagagtc
cctacccaactcagtcctcactacagcgagaagagaggcagcgctgacagtctggtggaa
gcggtcttgatttctgaaggtttggggttatacgccaaggatccaaaatttgtagccttt
gccaagcgtgagattgcagatgcctgtcacatgaccatagatgagatggaaagtgctgca
agtgatcttttaagccgtgggggctctggggaaagccaaggctttctgaaccacgcagac
atgggacccacatacagtgacgaggagccaatcaggagccacgaggaagaggagctagct
gatgagatgacttgtgttacgtctttctga
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integrated database retrieval system
