Chanodichthys erythropterus (predatory carp): 137031225
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Entry
137031225 CDS
T10334
Symbol
traf6
Name
(RefSeq) TNF receptor-associated factor 6 isoform X1
KO
K03175
TNF receptor-associated factor 6 [EC:
2.3.2.27
]
Organism
cery Chanodichthys erythropterus (predatory carp)
Pathway
cery04010
MAPK signaling pathway
cery04120
Ubiquitin mediated proteolysis
cery04140
Autophagy - animal
cery04144
Endocytosis
cery04620
Toll-like receptor signaling pathway
cery04621
NOD-like receptor signaling pathway
cery04622
RIG-I-like receptor signaling pathway
cery05132
Salmonella infection
cery05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cery00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
137031225 (traf6)
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
137031225 (traf6)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
137031225 (traf6)
04140 Autophagy - animal
137031225 (traf6)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
137031225 (traf6)
04621 NOD-like receptor signaling pathway
137031225 (traf6)
04622 RIG-I-like receptor signaling pathway
137031225 (traf6)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
137031225 (traf6)
09171 Infectious disease: bacterial
05132 Salmonella infection
137031225 (traf6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cery04131
]
137031225 (traf6)
04121 Ubiquitin system [BR:
cery04121
]
137031225 (traf6)
Enzymes [BR:
cery01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
137031225 (traf6)
Membrane trafficking [BR:
cery04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
137031225 (traf6)
Ubiquitin system [BR:
cery04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
137031225 (traf6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
zf-TRAF
zf-C3HC4
zf-C3HC4_2
zf-RING_2
zf-C3HC4_3
zf-RING_UBOX
TRAF3_RING
zf-C3HC4_4
zf-RING_5
TRAF6_Z2
RING_XB3-XBAT31
zf-TRAF_2
U-box
DM
DUF4472
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
137031225
NCBI-ProteinID:
XP_067258120
LinkDB
All DBs
Position
11:20080256..20086291
Genome browser
AA seq
542 aa
AA seq
DB search
MACNDMEKSSLDDACCDGAFSSCAAAMEKERDSYLSPTENPSTISVSSSVPPDQQGYDVE
FDPPLESKYECPICLMGLRSAVQTPCGHRFCNSCIRKSIRDTGQKCPVDNEVLLEEQLFP
DNFAKREILSLTVRCPNEGCTDKMELRQLERHLSQCKFATVPCPQCLESVRKSHLDEHKS
QQCLQRLMTCPACAESFVYATKQIHEQICPFANTVCEYCEMELIRDQLALHCDTDCLKAP
VACTFSTFGCREKMPRNELAQHMQEFTQMHMRYMAEFLRSQSLNSCLMPSVAAHSSSDER
GASSRAADSCQCKQELLNLRETVLELEGRLVRQDQQIRELCIHNETQKNQVTELRRKLSS
LEEATRELEAQQYQGVYVWRLENFSLHLRNQEAGQPIVLHSPPFYTGRPGYKLCLRLHLQ
TPSAPRCSNYISLFVHTMQGEFDSQLSWPFQGTIRLAVLDQVEGQHHVEVMETKPDLQAF
QRPTVQRNPKGFGYVTFLHLQALRQRGFVKEDVLLVRCEVTPRFDASLRREGVQPRGPEP
SL
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atggcttgcaacgacatggagaagtccagccttgatgatgcctgctgtgatggcgcgttc
tccagttgtgcagcagccatggagaaagagagagactcgtatctgagcccgacagagaac
ccctccaccatcagtgtctcttctagtgtccccccagaccagcaaggctatgatgtagag
tttgaccctccgctagagagcaagtatgagtgcccaatctgtctaatgggtcttcgctcg
gcagtacagacaccatgtggacatcgattctgtaactcatgcatcaggaagtccatcagg
gacacagggcagaaatgtccagttgacaatgaggtgctgctcgaggaacagctcttccct
gataactttgccaaaagagagatcctctcactcactgtcagatgtcctaatgaaggatgc
actgataaaatggagttgcgccaactggagagacacctgtctcagtgtaagtttgccaca
gtgccatgccctcagtgtctggagtctgttcgtaagagccatctggacgaacacaagagc
cagcagtgcttacagcggcttatgacctgtcctgcctgcgcagaaagttttgtgtatgct
accaaacagattcatgaacagatttgtcctttcgccaatacagtgtgtgaatattgcgaa
atggagcttattcgggatcagctggcattacactgtgacacagactgtttgaaagctcct
gtagcctgtactttcagcacttttggttgtcgtgaaaagatgccgagaaatgaacttgct
cagcacatgcaggaatttacacagatgcacatgcgttacatggctgagtttctgcgcagc
caatctctcaatagctgcctaatgccatcagttgctgcccactcatcgtcagacgaacgt
ggtgcctcttcccgtgcggcagattcttgccagtgtaaacaggagctgttaaacctgagg
gagactgttttagagctggagggtcggctggtgcgtcaagatcagcagatccgggagctt
tgcatccacaacgagacacagaaaaaccaggtcaccgaactacggcgaaagctgagctca
ctggaggaggcaacccgagagctagaagcccagcagtaccaaggcgtctacgtgtggcgc
ttggagaacttctcacttcacctgcgtaaccaagaggccggtcagcccatagtcctccac
agtccacctttctatacgggccggccgggatacaaactctgcctccgactgcatctccaa
acccccagcgctcctcgctgttccaactacatctcgcttttcgtgcacactatgcagggt
gagtttgacagccagctctcctggcccttccaaggcacgatccgactggcagtgttggac
caggtcgaggggcagcaccatgtggaagtgatggagaccaagccggacctgcaggccttc
cagaggcccaccgtgcagcgcaaccccaagggttttggctacgttactttcctgcaccta
caggcattgcggcagcgtggctttgtgaaagaggacgtgctgttggtgcgctgtgaggtc
acaccacgattcgatgctagcctcaggagggagggggtccaacctcggggcccagaacct
tcactttga
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integrated database retrieval system
