Chanodichthys erythropterus (predatory carp): 137031225
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Entry
137031225 CDS
T10334
Symbol
traf6
Name
(RefSeq) TNF receptor-associated factor 6 isoform X1
KO
K03175
TNF receptor-associated factor 6 [EC:
2.3.2.27
]
Organism
cery Chanodichthys erythropterus (predatory carp)
Pathway
cery04010
MAPK signaling pathway
cery04120
Ubiquitin mediated proteolysis
cery04140
Autophagy - animal
cery04144
Endocytosis
cery04620
Toll-like receptor signaling pathway
cery04621
NOD-like receptor signaling pathway
cery04622
RIG-I-like receptor signaling pathway
cery05132
Salmonella infection
cery05168
Herpes simplex virus 1 infection
Brite
Enzymes [BR:
cery01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
137031225 (traf6)
Membrane trafficking [BR:
cery04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
137031225 (traf6)
Ubiquitin system [BR:
cery04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
137031225 (traf6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
137031225
NCBI-ProteinID:
XP_067258120
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Position
11:20080256..20086291
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AA seq
542 aa
AA seq
DB search
MACNDMEKSSLDDACCDGAFSSCAAAMEKERDSYLSPTENPSTISVSSSVPPDQQGYDVE
FDPPLESKYECPICLMGLRSAVQTPCGHRFCNSCIRKSIRDTGQKCPVDNEVLLEEQLFP
DNFAKREILSLTVRCPNEGCTDKMELRQLERHLSQCKFATVPCPQCLESVRKSHLDEHKS
QQCLQRLMTCPACAESFVYATKQIHEQICPFANTVCEYCEMELIRDQLALHCDTDCLKAP
VACTFSTFGCREKMPRNELAQHMQEFTQMHMRYMAEFLRSQSLNSCLMPSVAAHSSSDER
GASSRAADSCQCKQELLNLRETVLELEGRLVRQDQQIRELCIHNETQKNQVTELRRKLSS
LEEATRELEAQQYQGVYVWRLENFSLHLRNQEAGQPIVLHSPPFYTGRPGYKLCLRLHLQ
TPSAPRCSNYISLFVHTMQGEFDSQLSWPFQGTIRLAVLDQVEGQHHVEVMETKPDLQAF
QRPTVQRNPKGFGYVTFLHLQALRQRGFVKEDVLLVRCEVTPRFDASLRREGVQPRGPEP
SL
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atggcttgcaacgacatggagaagtccagccttgatgatgcctgctgtgatggcgcgttc
tccagttgtgcagcagccatggagaaagagagagactcgtatctgagcccgacagagaac
ccctccaccatcagtgtctcttctagtgtccccccagaccagcaaggctatgatgtagag
tttgaccctccgctagagagcaagtatgagtgcccaatctgtctaatgggtcttcgctcg
gcagtacagacaccatgtggacatcgattctgtaactcatgcatcaggaagtccatcagg
gacacagggcagaaatgtccagttgacaatgaggtgctgctcgaggaacagctcttccct
gataactttgccaaaagagagatcctctcactcactgtcagatgtcctaatgaaggatgc
actgataaaatggagttgcgccaactggagagacacctgtctcagtgtaagtttgccaca
gtgccatgccctcagtgtctggagtctgttcgtaagagccatctggacgaacacaagagc
cagcagtgcttacagcggcttatgacctgtcctgcctgcgcagaaagttttgtgtatgct
accaaacagattcatgaacagatttgtcctttcgccaatacagtgtgtgaatattgcgaa
atggagcttattcgggatcagctggcattacactgtgacacagactgtttgaaagctcct
gtagcctgtactttcagcacttttggttgtcgtgaaaagatgccgagaaatgaacttgct
cagcacatgcaggaatttacacagatgcacatgcgttacatggctgagtttctgcgcagc
caatctctcaatagctgcctaatgccatcagttgctgcccactcatcgtcagacgaacgt
ggtgcctcttcccgtgcggcagattcttgccagtgtaaacaggagctgttaaacctgagg
gagactgttttagagctggagggtcggctggtgcgtcaagatcagcagatccgggagctt
tgcatccacaacgagacacagaaaaaccaggtcaccgaactacggcgaaagctgagctca
ctggaggaggcaacccgagagctagaagcccagcagtaccaaggcgtctacgtgtggcgc
ttggagaacttctcacttcacctgcgtaaccaagaggccggtcagcccatagtcctccac
agtccacctttctatacgggccggccgggatacaaactctgcctccgactgcatctccaa
acccccagcgctcctcgctgttccaactacatctcgcttttcgtgcacactatgcagggt
gagtttgacagccagctctcctggcccttccaaggcacgatccgactggcagtgttggac
caggtcgaggggcagcaccatgtggaagtgatggagaccaagccggacctgcaggccttc
cagaggcccaccgtgcagcgcaaccccaagggttttggctacgttactttcctgcaccta
caggcattgcggcagcgtggctttgtgaaagaggacgtgctgttggtgcgctgtgaggtc
acaccacgattcgatgctagcctcaggagggagggggtccaacctcggggcccagaacct
tcactttga
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