Chanodichthys erythropterus (predatory carp): 137031729
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Entry
137031729 CDS
T10334
Symbol
trpc5a
Name
(RefSeq) short transient receptor potential channel 5a
KO
K04968
transient receptor potential cation channel subfamily C member 5
Organism
cery Chanodichthys erythropterus (predatory carp)
Brite
KEGG Orthology (KO) [BR:
cery00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cery01009
]
137031729 (trpc5a)
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cery04040
]
137031729 (trpc5a)
Protein phosphatases and associated proteins [BR:
cery01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
137031729 (trpc5a)
Ion channels [BR:
cery04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
137031729 (trpc5a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank
Ank_3
Ank_4
Ank_5
PKD_channel
YVC1_C
LHD_TRPY1
Motif
Other DBs
NCBI-GeneID:
137031729
NCBI-ProteinID:
XP_067259055
LinkDB
All DBs
Position
12:complement(10838706..10930611)
Genome browser
AA seq
1040 aa
AA seq
DB search
MNPLSHLYYKKSSYSPYRDRIPLQIVRAEVELSLEERSFLLAVEKGDYAGVQHALREAEV
YYNIDVNCVDPLGRSALLIAIENENLEVMELLLDHGVNTGDALLYAIRKEVVGAVELLLS
HRKPSGEKQVPSLMMDAQFSEFTPDITPIMLAAHTNNYEIIKLLVQRKVTIPRPHQIRCD
CVECVSSSEVDSLRHSRSRLNIYKALASPSLIALSSEDPILTAFRLGWELKELSKVENEF
RQEYEELSQQCKLFAKDLLDQARSSRELETILNHRDDQSEELDPRECRDLAKLKLAIKYH
QKEFVAQPNCQQLLATLWYDGFPGWRRRHWAVKLVMCFIIGLLFPVFSLIYLLAPKSTLG
LFIKKPFIKFICHTASYLTFLFLLLLASQHIARTNLHMQGPPPTVVEWMILPWVLGFIWA
EIKEMWDGGFNEYVHDWWNLMDFAMNSLYLATISLKIVAYVKYNSSRPREEWEMWHPTLI
AEALFAIANIFSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLNQ
LYFYYETEAADEPNHCKGIRCEKQNNAFSTLFETLQSLFWSIFGLLNLYVTNVKARHEFT
EFVGATMFGTYNVISLVVLLNMLIAMMNNSYQLIADHADIEWKFARTKLWMSYFDEGGTL
PPPFNVVPSPKSFWYLCLWVHGRLCGSETAPPEEEPHKHENLKEFTEKHADRLIQNQHYQ
EVIRSLVKRYVASMIRNAKTSEGLTEENFKELKQDISSFRYEVLDLLGNRKPPRRNYSSS
SEATLRDEVSDEGEACYHSDGSSVGAKGVSFKTITPSDPSYGVSALFRSISGMEPSTATA
SSAYREDKPKINGLRKNPSPSSSLSSVAPARPALSRTWRRFSRFSSSKKNSFRRLGLLFS
RMGSHIPQPAGVTAATYTISDGLLHPPGAWQDLGFTRGDGPVTRSETNLNQVDVAALNEG
DSVAMTTNGQRVNGRDVLLTLGPLSPSSSLHCASSFSASSSRLLDSNEDVFQGLVGPCGG
QTPDSSRWVTEQDDSVTTQL
NT seq
3123 nt
NT seq
+upstream
nt +downstream
nt
atgaatcccttgtcacatctatactacaaaaagagcagctactctccgtaccgggaccga
atccctctacagatcgtccgggcagaggtagagctctctctagaggagcgttcattcctt
ttggccgtggaaaagggtgactatgcaggggttcaacatgcactacgtgaggcagaggtc
tattacaacattgatgtgaactgtgtggatccactaggccgcagcgcgctgctaattgct
attgaaaatgagaaccttgaggtgatggagctacttctggatcacggagtgaacaccgga
gacgctctgctctacgccatccgcaaagaagtggtaggagccgtggagttactgctgtcc
cacaggaaacccagtggagagaaacaggttccatcattaatgatggacgcccagttttca
gagttcacacctgacattactcccatcatgcttgccgcccacacaaacaactatgaaatc
atcaaactcctggtccaacgcaaagtcaccatccctcggccgcaccagatccgctgtgac
tgtgtggagtgtgtgtccagctctgaagtggacagcttgcgtcactctcggtcccgtctc
aacatctataaagcgctcgccagcccctcactcatcgccctctccagcgaggatcccatc
ctaaccgccttcagattgggctgggaactgaaggagctcagtaaagtggagaacgagttt
cgacaagaatacgaagagctttctcaacagtgtaagctctttgctaaagacctgctggac
caggcacgtagttcccgtgagctggagaccatcctcaatcaccgcgatgaccagagcgag
gagctggacccgcgagagtgccgagacttggccaaactcaagctggccattaaatatcac
cagaaagagtttgtggcacagccaaactgtcagcagctcttggccacactatggtatgac
ggctttcctggctggcggcgccgtcactgggcagttaagcttgtcatgtgtttcattatc
ggccttctcttccctgtcttctcgctgatctacctgctggctccaaaaagcacgctggga
ctcttcatcaaaaaacccttcatcaaatttatctgccatacggcctcctacctcaccttc
ctcttcctcctcctcttggcctcacagcacattgcacgcaccaacctacacatgcagggc
cctccgcccactgtggtggagtggatgatactaccttgggtgctgggcttcatatgggct
gagattaaggagatgtgggatggaggttttaatgagtacgtccatgactggtggaacctg
atggactttgctatgaattctctctatttggccactatttctttaaagatcgttgcttat
gtcaagtataacagttctcgtccacgagaggaatgggagatgtggcatccgactttaatc
gccgaggctttgtttgccatcgctaacatcttcagctcgcttcggctcatctccctcttc
acggccaactctcacctgggcccgctgcagatttctctgggccgcatgctgctggacatc
ctcaagttcctcttcatctactgtctagtgctgctggcctttgccaatggactcaaccag
ctttacttctactacgagacagaggcggcagacgaacccaaccactgcaaggggatccgc
tgcgagaaacagaataatgcattctctacgttatttgagacacttcagtctctgttctgg
tcgatatttggcctcctgaatctttatgtaaccaatgtgaaagcacggcacgagttcact
gagtttgttggagctaccatgtttggcacctacaacgtcatctcactggtggttctcctc
aacatgctcatcgctatgatgaacaactcctaccagctcatcgctgaccatgctgatatc
gaatggaagtttgctcggaccaagctgtggatgagttactttgatgagggagggacactc
cctccaccattcaatgtagtccccagtcctaagtctttctggtacctgtgtctatgggta
cacgggcggctctgcgggtcggagactgctccgcctgaagaagaaccccataaacacgag
aatctgaaggagtttacggaaaagcatgctgacaggctgatacagaatcagcattatcag
gaggtcattcgtagtctagtgaagaggtacgtggcgtccatgatccgcaacgctaagaca
agcgaagggctaacggaggagaattttaaggagctgaaacaggacatttccagctttcgc
tacgaagttttggatcttctcggcaaccgaaagccgccccggcggaactattcctccagc
agcgaggccacgcttcgagacgaggtcagcgacgaaggcgaggcctgttatcacagtgat
gggagcagcgtcggggccaagggtgtctctttcaaaaccatcacgccttcagatccgtcg
tacggagtctccgccctttttcgctccatctccggaatggagccgtcaacagcgacagca
tcgtctgcgtacagggaagataaaccaaagatcaacggactgaggaagaatccctcgccc
tcctcttccctgtcctcagtggctccagcaagacctgcactttcacggacttggaggcgc
ttttcccgcttctctagctccaagaagaactccttcagacggctcgggctgctgttctca
cgcatgggcagccacattccgcagcccgcaggtgttactgctgcaacctacactatctca
gatggattgcttcacccgccgggggcttggcaggacttgggcttcaccagaggcgacggt
ccagtcacccgcagcgagaccaaccttaatcaggtggacgtggccgctttaaatgagggc
gacagtgttgccatgacaaccaatggacagagagttaacgggagggatgttttactgaca
ttaggacctctgtccccatcttcttctctgcactgtgcttccagtttctccgcctccagc
tcccgcctcctggactcgaatgaggacgtgttccagggattggtcgggccctgtggcgga
caaacgccagactcgtcccgctgggtaacggaacaggacgattctgtgaccacgcagcta
tag
DBGET
integrated database retrieval system
