Chanodichthys erythropterus (predatory carp): 137032873
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Entry
137032873 CDS
T10334
Symbol
smcr8b
Name
(RefSeq) guanine nucleotide exchange protein smcr8b
KO
K23611
guanine nucleotide exchange protein SMCR8
Organism
cery Chanodichthys erythropterus (predatory carp)
Pathway
cery04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
cery00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
137032873 (smcr8b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cery04131
]
137032873 (smcr8b)
Membrane trafficking [BR:
cery04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
137032873 (smcr8b)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Folliculin
UPF0181
Motif
Other DBs
NCBI-GeneID:
137032873
NCBI-ProteinID:
XP_067260967
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Position
12:9195354..9202043
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AA seq
989 aa
AA seq
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MIGSPDLVAFTKQTDFSEIDPSALPEELSVPMYPYTGDITPWSRMSGANFKKDFILLSEF
SEQVGPQPLLTVPSETKACGTFDLNHFSLRIMSVDYQTSLASPAGCGSLKLNFVEDSKVV
LGDSREGVFAYVHHLTLYDLEARGFVRPFCLAYVSSDENKIIQQFQQLSSEFSRVSECLK
TGNRKNFANELEIKLRNLEYTRVMLHREIERELNNASVKCTNEREWMMNGIPTLDRNTED
VKLKECETKIKLQEKDGCGISGKAEVECEKENRPCITHEKDKRFGDRRKDKQGNRSFPMP
LANNEHELATVEKLIQDYKSLLKQVTCYPTRKLRNSEYSPYEPDDLPHSLELDLDDLKHD
QLVGPMLECNVFTYTNTPSHSSRFDKRLKTLEELCDDYFHQQALQQLYSIERTFRGDICH
LYTQQLCRNLLRNLKSTNFLFEDPCDLESAGLQTGIAGQHSVRQPSFLPAPSILSEPVSL
ESYASCVEMVPIKLQLGGSSQSPVVPSSVNTPSEDSLPLTSDTAPVEAEVENEGAVSALD
YQENVEYVSALMKTSISSGDSIEVLGTEKSFRSQGSNLPMDTAMQRPPPLSTTAALVYLR
QGRVPTRRTCSEDSIEVLSTTESILPEELRASYPCVIDEEIPEQENDEKDMRQKQDKNAE
CVLDVGNVPGDHGGACLLEQQGFYPAVTLTPPDCPITLTLGGSSSQDACHVTESLPFSLL
DEPCRTEPDDLSDCFSYLSTTASTTSECPFSVCLPGDKREGGTRRKRGRAGRAALQFLRQ
FPFAVHAVFSLLSGRTLVVLGNEEAAVRRLVTALSVYVPHLSRYRDSIQPWTSMPLQLTD
LLNWKLIGFNRMCCFTHTNLPHCLGHYSRYLSVLDVDQKTLRCPTYSGTLINLLVDPRSH
FKRGNTYFMFAQSVQSKLVTRAFLLTFLHGHHTTRRPLENTRTESFLSEFHKDDKKILNY
LSELIKLNFMEIPPNILRFSYTTSSVFKL
NT seq
2970 nt
NT seq
+upstream
nt +downstream
nt
atgattggttctccagacttggtggctttcactaaacaaacagatttcagtgaaatagac
ccatcagctcttccagaggaactgtctgtgcccatgtatccctacactggggacatcacc
ccatggtccaggatgtctggtgctaattttaagaaggactttatccttttatcagagttt
tcggagcaagttgggccccaacctttgcttactgttccttctgaaaccaaggcttgtggg
acgtttgatttgaaccacttctcccttcgaattatgtcagtggactatcagacctccctc
gccagcccggcaggttgtggctctttgaaattgaactttgtagaagactcaaaggtagtt
ttaggggattctagagaaggagtatttgcatatgtgcaccaccttacgctatatgacctg
gaggctcgtggatttgtgcgacctttctgcctggcctatgtgtcgtctgatgagaataaa
atcatacaacaattccagcagctttcctcagagttctctagagtctctgaatgtctgaaa
acggggaacaggaagaactttgcgaatgaactggagataaaactaagaaatctggagtat
acaagagtcatgttacatagagagatagaaagagagttaaataatgcatctgtaaagtgc
accaatgaaagggaatggatgatgaatggtatacctacattagatagaaatacagaagat
gtgaaactcaaagaatgtgaaactaaaattaaattgcaagagaaagacggatgtggaatt
tcaggaaaggcagaagtagagtgtgaaaaggagaacaggccatgtattacacatgagaaa
gataaacggtttggggatcgaaggaaggacaagcagggtaatagatctttcccaatgcca
ttggctaacaatgaacacgagttggccactgtagaaaaattgattcaggattataaaagc
cttttaaaacaggtcacttgctacccaaccaggaaactcagaaactctgagtactctcct
tatgaaccagatgacctccctcactctctggaacttgacctggatgatttaaagcacgat
cagcttgttgggccaatgctagaatgcaatgtttttacttacacaaacacaccctcgcat
tcttcccgatttgacaagcgtctgaaaactcttgaagaattgtgtgacgactacttccac
caacaggctctacagcaactgtactccattgagaggacattcagaggagatatttgccat
ctctacacacaacaactctgccgtaatcttctccgcaaccttaaatctaccaatttctta
tttgaggatccatgtgacttggaaagtgctggattacagacgggaatagctggtcaacat
tcagtccgacaaccctcctttcttcctgcaccctcaattctaagtgaacctgtcagtctt
gagtcatatgcctcctgtgttgaaatggtgccaatcaaactacagttaggtggatctagc
caatctccagttgtacccagctctgtaaataccccttccgaggatagcctacccttgaca
tccgacaccgcccctgtagaagctgaagtggaaaatgagggagcagtttcagctctggat
tatcaagaaaatgtggaatatgtttcagctttgatgaagaccagtattagtagtggagac
agtattgaggtcttagggacggagaagtccttcagatcgcagggttcaaatttaccaatg
gatacagcaatgcaaagaccaccacctttgtccactacagctgcactagtgtatctaagg
caagggagggtacctactagacggacttgcagtgaagacagcattgaggtgcttagcaca
acagaatccatcctaccagaagaactgcgtgcctcatacccttgcgtaattgatgaggaa
atcccagagcaagagaatgatgagaaagacatgcgtcaaaaacaagacaaaaatgctgaa
tgtgttttggatgtgggcaatgttcctggagatcatggaggtgcctgtttgctggagcag
caaggtttttatcctgccgtcaccctgaccccacctgactgtcctattactttgactcta
ggtgggtcaagctctcaagatgcttgtcatgtaacagaatcgctccctttctcattgtta
gatgagccctgtcggacagaacctgatgatttgtcagactgcttcagctacctgagcacc
actgcctccacaacctccgaatgccctttctctgtttgtcttcccggggataaaagggaa
ggtgggaccagacggaagcgtggcagagcagggcgggcagcattgcagttcttgcgacag
tttccctttgcagttcacgcagtgtttagccttctaagtggccgaacattggtggtacta
ggcaacgaggaggctgcagtgagacgactagtaacagcactttctgtgtatgtgccacat
ctgagtagatacagagacagcattcagccatggacttcaatgccgctgcagcttactgac
ctgctcaactggaaacttatcggctttaataggatgtgctgttttactcacacaaatttg
cctcactgcctgggccattatagccgatacctcagtgttctagatgtggatcaaaagaca
ctgcgctgcccaacatacagtggtactctaatcaacctgctggtggatccaaggagccac
ttcaaacgtggaaacacctacttcatgtttgctcaaagtgtgcaaagcaagcttgtcacc
agagcattccttttaacatttttacatggtcaccatacaacaagaaggcctttggaaaat
acaaggacagaaagttttctttctgaatttcacaaagacgataagaaaatactcaactat
ttatctgagctcattaaacttaacttcatggagattccacccaacatcctccgattcagc
tacaccacatcctccgttttcaaactctga
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