Chanodichthys erythropterus (predatory carp): 137037751
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Entry
137037751 CDS
T10334
Symbol
kdm2ab
Name
(RefSeq) lysine-specific demethylase 2A isoform X1
KO
K10276
F-box and leucine-rich repeat protein 10/11 [EC:
1.14.11.27
]
Organism
cery Chanodichthys erythropterus (predatory carp)
Pathway
cery03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
cery00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
137037751 (kdm2ab)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cery03000
]
137037751 (kdm2ab)
04121 Ubiquitin system [BR:
cery04121
]
137037751 (kdm2ab)
03036 Chromosome and associated proteins [BR:
cery03036
]
137037751 (kdm2ab)
Enzymes [BR:
cery01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.27 [histone H3]-dimethyl-L-lysine36 demethylase
137037751 (kdm2ab)
Transcription factors [BR:
cery03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
137037751 (kdm2ab)
Ubiquitin system [BR:
cery04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
137037751 (kdm2ab)
Chromosome and associated proteins [BR:
cery03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
137037751 (kdm2ab)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
137037751 (kdm2ab)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHD_4
zf-CXXC
JHD
F-box-like
JmjC
DUF7885
F-box
LRR_6
Cupin_8
Rubredoxin
Motif
Other DBs
NCBI-GeneID:
137037751
NCBI-ProteinID:
XP_067217419
LinkDB
All DBs
Position
1:29357494..29375296
Genome browser
AA seq
1271 aa
AA seq
DB search
MEEESSRYSKRLRTGTRRRYQDDGISDDEIEGKRSFDLEEKLHCNRYNSDLVKIMDGKDF
TLEYIQQEGLRDPIIFKKADGLGIKMPDPDFSVSDVKLFVGSRRMVDVMDVTTQKGIEMS
MGQWRRYYETPPSEREKLYNVISLEFSHTKLEHLVKRPASVDMIDWVDNMWPRHLKERQR
DSTNAIIDMQYPKVQKYCLMSVEGCFTDFHIDFGGTSVWYHIHKGGKVFWLIPPTPQNLE
LYENWVLSGKQGDIFLGDKATACQRIDLKQGYTFMIPSGWIHAVYTPMDTLVFGGNFLHS
FNIPMQLNIYNIEDRTRVPAKFRYPFYFEMCWYVLERYLYCLTNTSHLTPEFQKHSLGIG
LKKEDVIKQGGIDGDAGSEEKEDVEVKEEPEDEAALTLPARPGVKVHLTPFELEGLWELL
HKLEDLPAHKKCVPAGIRNAPALLSDIRKLLEEHANDDPKLSYTGKPIVKWPKRPSWYQP
PPPPLSLLYRPRAPGSGSVMPPVPRPVKPSSSISALRRRRVRCKRCEACLRIECGDCNYC
RDMRKFGGPGRLKKSCVLRQCLAPALPLTAVCAICKEGYQESEDFESVQTLMECSECAQI
THPECIKVHVPGEGVINKDLPSCWECPKCVQGKKTESSSSSDEETASNGGRLSGTPAKRA
YREGIGVGGLRIGRRGRPPLSTSTPPLTRSRRQPPPSQRLLLQHQQNRKRAGALELQLRK
RIKLERNKILQSTSSSVSLSPKLLRQRSLERGGVIRAGPGRSISRGRGMSSCRGRGVRLR
GGGRGGGLRERMETEVERDDSVEEEQEERKENGQYNGKENRPQRRGVKAGEDENSDSHRN
GESEGSSEGGEPTPSDTSVVLNDDVRGQGSCVTVTLQPSRGRRDPSAIVPKLEANLSSRS
LPQNHKALLRPPLRNGAPRSDSPHSPVDRLHLNKSPLSSSHTLTRSTSKHSHVVRSLRSN
FKGSPHRLTRERIGKKARSERAKSSDSCPSSTLRPSPEQNGGNEPGWEREVWVSVFRYLT
RAELCVCMAVCKSWYKWGCDKRLWTRISLSQCRSISPQALTGIIKRQPVTLDLSGANISK
KQLSWLINRLPGLKDLVLSGCNWASVSALSSPSCPLLRSLDLSWADGVKDAQIRDLLNPP
GSDNRSQMKNMQCLWLCGLEVTEATLRLIIRHMPLLTRLELSHCPITDGALNLLSAVGSS
TRNTLTHLSLAGCSRLTDRCLVYLRRLSCLSVLDLRGCKGVSRQACESFISELSVNALYC
LSDDKLIQRIS
NT seq
3816 nt
NT seq
+upstream
nt +downstream
nt
atggaagaggagagttcacgttatagcaaacgcctgcggactggcacacggcggcgttac
caggatgatggaatttcagatgatgagattgaagggaagaggtcctttgaccttgaagag
aaactccattgtaaccgttacaactcggatctggtcaaaattatggatgggaaagacttc
accttggagtacatccaacaggagggactccgggaccccattatctttaagaaagcagat
ggccttggcataaagatgcctgacccggactttagtgtcagtgatgtgaaattgtttgtg
ggcagtcgcaggatggtcgatgtgatggatgtgaccactcaaaaaggcattgagatgtca
atgggtcagtggaggagatactacgaaacgccgccatctgagcgtgaaaagctgtacaat
gtcatcagccttgagttcagtcacacaaaactagagcatctagtcaagagacctgcctca
gttgatatgattgactgggtggacaacatgtggccacgtcatcttaaagaaagacagaga
gactccacgaatgccattatagacatgcagtaccctaaagtacagaagtattgtttgatg
agtgttgaaggatgcttcacagatttccacatagactttggtggtacatcagtctggtat
cacatccacaagggagggaaggtgttctggctaatcccacccacacctcaaaacttggag
ctctatgagaactgggtgttgtcagggaagcaaggtgacatctttcttggcgataaagcc
accgcatgccaacggattgatctaaagcaaggctacacattcatgatcccctcagggtgg
atccatgcagtgtacactccgatggatactctggtgtttgggggtaactttctccacagc
tttaacattcccatgcagctcaacatttacaacattgaggaccgcacacgggtccctgct
aagttccgctaccctttctactttgagatgtgttggtacgtgttggagcgttacttgtac
tgtctgaccaacacgtctcacctcacacctgagttccagaagcactcactgggcattggg
ctgaagaaggaagatgtgatcaaacaaggaggaattgacggtgatgcaggaagtgaagag
aaagaggatgtggaggtgaaggaggagcctgaggatgaggcagcactcactcttcccgct
cgtccaggggtgaaagttcacctgacgccctttgagctggagggattgtgggaattactg
cataagttggaggatttgccagcacacaagaaatgtgttccagcaggcatcagaaatgct
ccagcactgctcagtgacatacggaagctgctagaggaacatgccaatgatgaccccaaa
ttgtcttacactggaaaaccaattgtcaaatggcccaaaaggccctcgtggtatcagccg
ccaccgccgcctctgtctctgctttaccgcccacgtgctcccggttcaggctctgtgatg
ccaccggttcctcggcccgtgaagccgtcttcctccatctcagctctgagacgcagacgt
gtacgctgcaaacgctgtgaggcctgtctgcgcattgagtgcggcgactgcaactactgt
agggatatgaggaagtttggaggacctggcagactcaagaagagctgtgttcttcgacag
tgtcttgcaccggcgctacctcttactgcagtatgtgccatatgtaaggaaggctatcaa
gagtctgaagactttgagtccgtccagacgctcatggaatgctccgaatgcgctcagatc
actcatccagaatgtataaaggtacatgtacccggagagggtgttatcaataaggacctt
cccagttgttgggagtgtccaaaatgtgtccagggcaagaaaacagagtcttccagtagt
agtgacgaggagacggcgtccaatggcggtcgcttgtctggtactccagctaagcgagca
tacagagagggaattggggtggggggcttgcgtatagggcgcagaggtcgcccgcccctc
tccacctccaccccgcctctgacccgctccagacggcaaccgcccccttcccagagactc
ctgctgcaacaccagcaaaacaggaagagagcaggggcactggagttacagctcaggaaa
agaataaaattggaaaggaacaaaatcctccagtcgaccagttcgtctgtctctctttct
ccaaagctcctgcgtcagcggagtctggagagagggggtgtaatcagagcaggacctggc
cggagtatttcccgtggccgagggatgtcatcctgtcgcggaagaggggtacgactacgt
ggcggtggaagaggtggaggtctgagagaaagaatggagacggaagtagaaagagatgat
tctgtggaagaagaacaggaggaaaggaaagagaacggacagtataatggtaaagagaac
cgtcctcagagacgaggcgttaaagcaggtgaagacgagaacagcgacagtcatcgaaac
ggagagagcgaggggagcagcgagggaggagagccgactccgtctgatacttctgtggtg
ctaaatgatgatgtcagaggccaggggtcctgcgtcacggtgacgttacagccatcgaga
ggtcggcgcgacccaagcgccattgttcccaaattggaagccaacttgtcttctagaagc
cttccgcaaaaccacaaagccctgctccgtcccccattgagaaatggcgcccctcgctca
gacagtcctcattcgcctgtggacagattgcacctaaacaaatcacctctttcatcatca
cacactctgacgaggagcacatcgaaacactcacacgtggtgcggagtctgagatcaaac
tttaaaggctcccctcaccggctaactcgagagagaattgggaaaaaggctcgatcggaa
agggcaaagtcatccgactcctgtcccagttccaccttacggccctcgccggagcagaac
ggagggaacgagccaggctgggagagagaggtttgggtgtccgtgttccgctacttgacc
cgtgcagagctgtgcgtttgcatggccgtttgcaagagttggtacaaatggggctgtgac
aagcgtttatggacgcggatcagtctgagccagtgccgctctataagtccacaggccctc
acaggcatcatcaaacggcagcctgtcacactggacctctccggggccaacatctccaag
aagcagctcagttggctcatcaatcgcctgccaggccttaaagatctggtgctatcaggg
tgtaattgggcatcagtttccgcactgagctctccaagctgtcctttactgcgctcttta
gacctgagctgggcagacggagtcaaggacgctcaaatcagggatctgctgaacccacca
ggcagtgataaccgttcccagatgaagaatatgcagtgcttgtggctgtgcggtctggag
gtgactgaagccacgctgaggctgatcatcagacacatgcctctgctcacacgcctggag
ctctcgcattgtcccatcacagatggtgctctcaacctcctcagcgcagtgggctcctcc
acacgcaacacactcacacacctcagcttagcaggttgcagccgcctgacagaccgatgt
ctggtgtacctgcgccgtttgtcctgtctgtccgtactggaccttcgcggctgcaaaggt
gtctcgcggcaagcatgtgaaagctttatctccgagctgtctgtcaatgccctctactgc
ctatcagatgacaaactcatccagaggatatcgtaa
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