Canis lupus familiaris (dog): 102154724
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Entry
102154724 CDS
T01007
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm3
KO
K12622
U6 snRNA-associated Sm-like protein LSm3
Organism
cfa
Canis lupus familiaris (dog)
Pathway
cfa03018
RNA degradation
cfa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cfa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102154724
09123 Folding, sorting and degradation
03018 RNA degradation
102154724
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cfa03019
]
102154724
03041 Spliceosome [BR:
cfa03041
]
102154724
Messenger RNA biogenesis [BR:
cfa03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
102154724
mRNA degradation factors
5'-3' decay
Lsm complex
102154724
Spliceosome [BR:
cfa03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
102154724
Complex C
U2 snRNP components
102154724
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
RimP_C
TIG_SUH
Glutaredoxin
Motif
Other DBs
NCBI-GeneID:
102154724
NCBI-ProteinID:
XP_038521383
LinkDB
All DBs
Position
11:<51262773..51264841
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AA seq
102 aa
AA seq
DB search
KTVEDVDQQLTINTVEKPLDLIRLSLDEQIYVKMRNDRELRGRLHACDQHLNMILGDVEE
TVTIEIDEETYEEIYKSTKRNIPMLFVRGDGVVLVAPPLRVG
NT seq
309 nt
NT seq
+upstream
nt +downstream
nt
aagacagtggaggacgtggaccagcaactaactatcaacaccgtagaaaagcccctggat
ctcatcaggctcagcctggatgagcaaatttatgtgaaaatgagaaatgaccgagagctt
cgaggccgattacatgcatgtgatcaacatttaaatatgatattgggagatgtggaagaa
actgtgactatagaaattgatgaagaaacatatgaagagatatataaatccacaaaacgg
aatattccgatgctttttgtccggggagatggtgttgtactagttgctcctccattaaga
gttggctga
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