Canis lupus familiaris (dog): 479344
Help
Entry
479344 CDS
T01007
Symbol
HMGCS1
Name
(RefSeq) hydroxymethylglutaryl-CoA synthase, cytoplasmic isoform X1
KO
K01641
hydroxymethylglutaryl-CoA synthase [EC:
2.3.3.10
]
Organism
cfa
Canis lupus familiaris (dog)
Pathway
cfa00280
Valine, leucine and isoleucine degradation
cfa00650
Butanoate metabolism
cfa00900
Terpenoid backbone biosynthesis
cfa01100
Metabolic pathways
cfa03320
PPAR signaling pathway
Module
cfa_M00095
C5 isoprenoid biosynthesis, mevalonate pathway
Brite
KEGG Orthology (KO) [BR:
cfa00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
479344 (HMGCS1)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
479344 (HMGCS1)
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
479344 (HMGCS1)
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
479344 (HMGCS1)
Enzymes [BR:
cfa01000
]
2. Transferases
2.3 Acyltransferases
2.3.3 Acyl groups converted into alkyl groups on transfer
2.3.3.10 hydroxymethylglutaryl-CoA synthase
479344 (HMGCS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_CoA_synt_C
HMG_CoA_synt_N
Cullin
Motif
Other DBs
NCBI-GeneID:
479344
NCBI-ProteinID:
XP_005619401
Ensembl:
ENSCAFG00000018572
VGNC:
103681
UniProt:
A0A8I3MM03
A0A8P0SMM6
LinkDB
All DBs
Position
4:66394617..66415022
Genome browser
AA seq
520 aa
AA seq
DB search
MPGSLPLNAEACWPKDVGIVALEIYFPSQYVDQAELEKYDGVDAGKYTIGLGQAKMGFCT
DREDINSLCLTVVQNLMERHSLSYDCIGRLEVGTETIIDKSKSVKTNLMQLFEESGNTDI
EGIDTTNACYGGTAAVFNAVNWIESSSWDGRYALVVAGDIAVYATGNARPTGGVGAVALL
IGPNAPLIFDRGLRGTHMQHAYDFYKPDMLSEYPIVDGKLSIQCYLSALDRCYSVYRKKI
RAQWQKEGNDKDFTLNDFGFMIFHSPYCKLVQKSLARMLLNDFLNDQNRDKNSIYSGLEA
FGDVKLEDTYFDRDVEKAFMKASAELFNQKTKASLLVSNQNGNMYTSSVYGSLASVLAQY
SPQQLAGKRIGVFSYGSGLAATLYSLRVTQDATPGSALDKITASLCDLKSRLDSRTCVAP
DVFAENMKLREDTHHLVNYIPQSSVDSLFEGTWYLVRVDEKHRRTYARRPSPSEDTLGEG
VGLVHSSAATEHIPSPAKKVPRLPATAAEAEAAVISNGEH
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgcctgggtcacttcctttgaatgcagaagcctgctggccaaaagatgtgggaattgtt
gcccttgagatctattttccttctcaatatgttgatcaagcagagttggaaaaatatgat
ggtgtagatgctggaaagtatactattggcttgggccaggccaagatgggcttctgcacg
gatagagaagatatcaactctctttgcctgactgtggttcagaaccttatggagagacat
agcctttcgtatgattgcattgggcgtttagaagttggaacagagacaatcattgacaaa
tcaaaatccgtgaagactaatttgatgcagctctttgaggagtctgggaacacagatata
gaaggaatagatacaactaatgcatgctatggaggcacagccgctgtcttcaatgctgtt
aattggattgagtccagctcctgggatggacggtatgccctggtagttgcgggagatatt
gctgtatatgccacaggaaatgctagacctacaggtggagtgggagctgttgctctgcta
attgggccaaatgcgcctttaatttttgaccgaggacttcgtgggacacatatgcagcat
gcctatgacttttacaagcctgacatgctttcagaatatcctatagtagatggcaaactc
tccatacagtgctacctcagtgcactagaccgctgctactctgtctaccgcaaaaagatc
cgagcccagtggcagaaagagggaaatgataaagattttaccttgaatgattttggtttc
atgatcttccactcgccctactgtaagctggttcagaagtctctagctcggatgttgctg
aatgacttccttaatgaccagaacagagataaaaatagtatatatagtggcctggaagcc
tttggggatgttaaattagaagatacctactttgatagagatgtggaaaaggcatttatg
aaggctagtgctgaactctttaatcagaaaacaaaggcatctttgcttgtgtcaaatcaa
aatggaaatatgtacacatcgtctgtttatggctccctcgcttctgttctagcacagtac
tcccctcagcagctggcaggaaagaggattggtgtgttctcttacggttctggtttggct
gccaccctgtactcccttagagttacacaagatgccacaccagggtctgctcttgataaa
ataacagcaagtttatgtgacctcaaatcaagacttgactcaagaacttgtgtggcacca
gatgtctttgctgaaaacatgaagctcagagaggacactcatcacttggtcaactatatt
cctcagagttcagtagattccctcttcgaagggacctggtacctcgtcagagtggatgag
aagcacaggaggacctatgcccggcgcccctcccccagtgaggatactctgggtgaagga
gtaggactcgtacattcaagtgcagccactgagcatatcccaagtcctgctaagaaagtg
ccaagactccctgccacagcagcagaagccgaagcagctgtcattagtaacggggagcat
taa
DBGET
integrated database retrieval system
