Canis lupus familiaris (dog): 482264
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Entry
482264 CDS
T01007
Symbol
IRF5
Name
(RefSeq) interferon regulatory factor 5 isoform X2
KO
K09446
interferon regulatory factor 5
Organism
cfa
Canis lupus familiaris (dog)
Pathway
cfa04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
cfa00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
482264 (IRF5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cfa03000
]
482264 (IRF5)
Transcription factors [BR:
cfa03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
482264 (IRF5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
DUF2262
Motif
Other DBs
NCBI-GeneID:
482264
NCBI-ProteinID:
XP_005628465
Ensembl:
ENSCAFG00000001611
VGNC:
42094
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All DBs
Position
14:complement(7411116..7421966)
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AA seq
590 aa
AA seq
DB search
MFTVSQISELSGLATFISPGSGWSLVQKGELSHQSFEAWGLGWGVSYSSCRSPDLGTALK
RGLAYGDFLAAWKWRLTTTTQKDPLAMNQPAPRAPPPPRRVRLKPWLVAQVNSCQYPGLQ
WVNGERKFFCIPWRHATRHGPSQEGDNTIFKAWAKETGKYTEGVDEADPAKWKANLRCAL
NKSRDFRLIYDGPRDMPPQPYKIYEVCSNGSAPAESQPSEDYTFGAGEEEEEEEEDLQRM
LPSLSITEAVQPGPPMAPYSLPKEDVKWPPTLQPPVVLGPPAPDPSLLGPTPGNPAGFGE
LLPEVLPSLQPGPLAASLPPTGEQLLPDLLISPHMLPLTDLEIKFQYRGRPPRALTISNP
QGCRLFYSQLEPTQDQVELFGPVSLEQVRFPSPEDIPSDKQRFYTNQLLDVLDRGLILQL
QGQDLYAIRLCQCKVFWSGPCASAHGSHPNPIQREVKTKLFSLEHFLNELILFQKGQTNT
PPPFEIFFCFGEEWPDRKPREKKLITVQVVPVAARLLLEMFSGELSWSADSIRLQISNPD
LKDRMVEQFKELHHLWQSQQRLQPVAQAPAVAGLSAGQGAWPMHSVGMQQ
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgttcacagtgagtcagatttctgagttgtctggtctggccactttcatttcccctggg
tctgggtggagtttggttcagaaaggggaactgagccaccagtcttttgaggcctgggga
ctgggctggggggtctcttactcttcctgtcgcagcccggatctgggcactgctctgaag
agaggcctggcctatggagactttttagcagcgtggaagtggcgcttaacaactacaacc
caaaaagaccccttggccatgaaccagcctgcccccagggcaccccctccgccccgccgc
gtgcgactgaagccctggctggtggcccaggtgaacagctgccagtacccagggcttcag
tgggtcaatggggaaaggaaattcttctgcatcccctggcgccatgccacgcgacatggc
cccagccaggagggggataataccatcttcaaggcctgggccaaggagacaggaaagtac
accgagggggtggacgaggcggacccagccaagtggaaggccaacctgcgctgtgccctt
aacaagagccgtgacttccgcctcatctatgatggaccccgggacatgccgcctcagccc
tacaagatctacgaggtctgctctaatggctccgctcccgcagagtcccagcctagtgag
gattacacttttggtgcaggagaggaggaggaggaagaagaggaagacctccagaggatg
ttaccaagcctgagcatcacagaagcagtgcaacctggcccccccatggcaccctattct
ttacccaaagaggatgtcaagtggccgcccaccctccagccgcctgtggtgctgggccct
cctgcaccagaccccagcctgctgggccccacccctggcaaccctgctggctttggggag
cttctccctgaagtcctgccgagcctgcagcctgggcccctggctgccagcctgcccccc
acaggcgaacaactcctgcccgacctgctaatcagcccccacatgctgcctctgacggac
ctggagatcaagttccagtaccgggggcggccaccccgtgccctcaccatcagcaacccc
caggggtgccggctcttctacagtcagctggagcccacccaggaccaggtagagctcttc
ggccccgtgagcctggagcaagtgcgcttccccagccctgaggacatccccagcgacaag
cagcgcttctacacaaaccagctgctggatgtcctggaccgcggcctcatactccagctg
cagggccaagatctgtatgccatccgcctgtgccagtgcaaagtgttctggagcgggccc
tgcgcctcggcccacggctcacaccccaaccccatccagcgggaggtcaaaaccaagctt
ttcagcctggagcattttctcaatgagctcatcctgttccagaagggccagactaacacc
ccaccgccatttgagatcttcttctgctttggggaggagtggcctgaccgcaaaccccga
gagaagaagctcatcactgtacaggtggtgcctgtagcagctcggctgttgctggagatg
ttctcaggggagctttcttggtcagctgatagtatccggctacagatctcaaacccagac
ctcaaagaccgcatggtagagcagttcaaggagctccatcacctctggcagtcccagcag
cggttgcagcctgtggcccaggcccccgctgtggcaggcctcagtgctggccagggggcc
tggcccatgcactcagttggcatgcaacaatga
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