Canis lupus familiaris (dog): 483376
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Entry
483376 CDS
T01007
Symbol
RFNG
Name
(RefSeq) beta-1,3-N-acetylglucosaminyltransferase radical fringe
KO
K05948
fringe [EC:
2.4.1.222
]
Organism
cfa
Canis lupus familiaris (dog)
Pathway
cfa00514
Other types of O-glycan biosynthesis
cfa04330
Notch signaling pathway
cfa05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
cfa00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
483376 (RFNG)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
483376 (RFNG)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
483376 (RFNG)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
cfa01003
]
483376 (RFNG)
Enzymes [BR:
cfa01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.222 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
483376 (RFNG)
Glycosyltransferases [BR:
cfa01003
]
Glycan extension
O-Glycan
483376 (RFNG)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fringe
DEC-1_N
Motif
Other DBs
NCBI-GeneID:
483376
NCBI-ProteinID:
XP_540495
VGNC:
45499
LinkDB
All DBs
Position
9:869336..873211
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AA seq
334 aa
AA seq
DB search
MSRARGALCRACLALAAALAALLLLPLPLPRVPAPAPAPAPAPAPTPGPGRPAPAPRLRP
DDVFIAVKTTQKNHGPRLGLLLRTWISRARQQTFIFTDGDDPELQLQGGGHVINTNCSAV
HTRQALCCKMSVEYDKFIESGRKWFCHVDDDNYVNPKGLLQLLATFSPSQDVYLGRPSLD
HPIEAAERVQGGGTVTTVKFWFATGGAGFCLSRGLALKMSPWASLGSFMSTAERVRLPDD
CTVGYIVEGLLGARLLPSSLFHSHLENLQRLPPDAVLRQVTLSYGGPDNPHNVVNVMGGF
SLQQDPTRFKSVHCLLYPDTDWCPVHKQSDLVSR
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgagccgcgcgcggggggcgctgtgccgggcctgcctcgcgctggcggccgccctggcc
gcgctgctgctgctgccgctgccgctgccccgcgtgcccgccccggcccccgcccccgcc
cccgccccggccccgaccccggggcccggccgccccgcccccgccccccgcctgcggccg
gacgacgtcttcatcgcggtcaagaccacgcagaagaaccacgggccgcgcctggggctg
ctgctgcgcacctggatctcccgggcccgccagcagacgttcatcttcacggacggggat
gaccctgagctacagctacagggaggcggccacgtaatcaataccaactgctcggccgtg
cacacccgccaggcactgtgctgtaagatgtcggtggagtacgacaagttcatcgagtcc
ggacgcaagtggttctgccacgtggacgacgacaactacgtgaaccccaagggcttgctc
cagctgctggccaccttctcgcccagccaggatgtgtacctggggcggcccagcctggac
catcccattgaggccgccgagagggtccagggaggtggaactgtgaccaccgtcaagttc
tggttcgctactggtggggccgggttctgcttgagcagaggcctcgctctgaagatgagc
ccctgggccagcctggggagcttcatgagcaccgccgagcgggtgcggctaccggacgac
tgcacggtgggctacatcgtggaggggctgctgggggctcgcctgctgcccagctcgctc
tttcactcccacctggagaacctgcagaggctgccgcccgacgcagtgctgcggcaggtc
accttgagctacggaggcccagacaacccacataacgtggtgaacgtgatgggaggtttc
agcctgcagcaggaccccacgcggttcaagtctgtccactgccttctctacccggacaca
gactggtgtcctgtgcacaagcagagtgaccttgtttctcggtga
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