Corynebacterium faecale: CFAEC_01235
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Entry
CFAEC_01235 CDS
T09289
Symbol
pdg
Name
(GenBank) Ultraviolet N-glycosylase/AP lyase
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
cfac
Corynebacterium faecale
Pathway
cfac03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cfac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CFAEC_01235 (pdg)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cfac03400
]
CFAEC_01235 (pdg)
Enzymes [BR:
cfac01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
CFAEC_01235 (pdg)
DNA repair and recombination proteins [BR:
cfac03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CFAEC_01235 (pdg)
Prokaryotic type
CFAEC_01235 (pdg)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
HHH_5
RecR_HhH
Motif
Other DBs
NCBI-ProteinID:
WJY91107
LinkDB
All DBs
Position
264586..265383
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AA seq
265 aa
AA seq
DB search
MAGSIGSITPQKRPRVGSHIANKGGETDIGRKRRARRVNRTLALAYPDAHCELDFTTPLE
LTVATILSAQCTDVRVNQITPALFRRYPTAFDYANADRDELEELIRPTGFYRNKASSLIG
LGQSLITHHGGEVPDTLEELVELPGVGRKTANVVLGNAFDVPGITVDTHFGRLVQRLALT
ELTDPVQVEHAIGALIEKPEWTMFSHRLIFHGRRICHSRRAACGACMLAADCPSFGLEGP
ADPVEAQKLIKSDDREHLLKMAGIE
NT seq
798 nt
NT seq
+upstream
nt +downstream
nt
atggctggctcaatcggatcgataaccccccagaaacgtccacgggttggttcccacatc
gccaataagggtggtgagacggatatcggcaggaaacgtcgagcccgtcgcgttaaccgg
acgctggccctggcgtatccggatgcccactgcgaattggatttcaccactccgctggaa
ctcaccgtggccacgatcctgtcggcgcaatgcaccgatgtgagggtcaatcagatcacg
cctgctctgtttcgtcgataccccacggccttcgactatgccaacgcagatcgcgatgaa
ctggaggagctcatccggcccaccgggttctaccgcaacaaggcgagctcactgatcggc
ctcggccagtcactgatcacgcaccacggtggggaggtgccggacacgcttgaggagctg
gtggaattacccggagtggggagaaagaccgcgaatgtggtgctgggcaatgccttcgat
gttccgggcataaccgtggacacccacttcggccggttggtgcaacgcctggcactgacg
gaattaactgaccctgttcaggtggagcatgcgatcggggcactgatcgaaaaacctgag
tggaccatgttctcccaccggctgatcttccatggacgtaggatatgtcatagcaggcgg
gcagcctgcggagcctgcatgctggcggccgactgtccatccttcgggttggagggtccg
gcggatcccgtggaggcgcagaagctgatcaagagtgatgacagggagcacctgctgaag
atggcagggattgaatag
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