Citrobacter farmeri: CI104_02320
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Entry
CI104_02320 CDS
T05012
Name
(GenBank) multidrug efflux RND transporter permease subunit
KO
K18142
multidrug efflux pump
Organism
cfar
Citrobacter farmeri
Brite
KEGG Orthology (KO) [BR:
cfar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cfar02000
]
CI104_02320
01504 Antimicrobial resistance genes [BR:
cfar01504
]
CI104_02320
Transporters [BR:
cfar02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
CI104_02320
Antimicrobial resistance genes [BR:
cfar01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
CI104_02320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF_C
MMPL
DUF3561
Motif
Other DBs
NCBI-ProteinID:
AST77994
UniProt:
A0A8H9NSV3
LinkDB
All DBs
Position
complement(457350..460463)
Genome browser
AA seq
1037 aa
AA seq
DB search
MANFFIRRPIFAWVLAIILMLAGALAIMQLPVAQYPTIAPPAVAISATYPGADAQTVQDT
VTQVIEQNMNGIDNLMYMSSTSDSAGSVTITLTFQSGTDPDIAQVQVQNKLQLATPLLPQ
EVQQQGISVEKSSSSFLLVAGFVSDNPQTTQDDISDYVASNVKDTISRQGGVGDVQLFGA
QYAMRIWLDANLLNKYQLTPVEVINQLKVQNDQIAAGQLGGTPALPGQQLNASIIAQTRL
KDPEEFGKVTLRVNSDGSTVRLKDVARIELGGESYNVVARINGKPAAGLGIKLATGANAL
DTAKAIKDKLVELQPFFPQGMKVVYPYDTTPFVKISIHEVVKTLFEAIVLVFLVMYLFLQ
NIRATLIPTIAVPVVLLGTFAILSAFGYSINTLTMFGMVLAIGLLVDDAIVVVENVERVM
MEDKLSPKEATEKSMSQIQGALVGIAMVLSAVFIPMAFFGGSTGAIYRQFSITIVSAMAL
SVLVALILTPALCATLLKPLSTEHHEQKGGFFGWFNAKFDLSVNHYTSSVSGIVRNTGRY
LIIYVLIFVGMAVLFLRLPTSFLPEEDQGVFMTMIQLPAGATQERTQKVLDQVTHYYLSN
EKANVESVFTVNGFSFSGQAQNAGLAFISLKPWDERSGKENSVEAVIARATHAFSQIPDG
LVFPFNMPAIIELGTATGFDFELIDQGGLGHAGLTSARNQLLGMVAKHSDLLVRVRPNGL
EDTPQFKLDVDQEKAQALGVALSDINETISASLGGSYVNDFIDRGRVKKVYVQADAKFRM
LPEDINNLYVRSANGKMVPFSAFSTARWVYGSPRLERYNGMPSMEILGEAAPGRSTGEAM
ALMEDLASKLPNGIGHDWTGMSYQERLSGNQAPALYAISLIVVFLCLAALYESWSIPFSV
MLVVPLGVVGALLAASLRGLNNDVYFQVGLLTTIGLSAKNAILIVEFAKDLMEKEGRGLI
EATLEAARMRLRPILMTSLAFILGVMPLVISRGAGSGAQNAVGTGVMGGMLTATLLAIFF
VPVFFVVVRGRFNKSQG
NT seq
3114 nt
NT seq
+upstream
nt +downstream
nt
atggcaaattttttcattagacgtccgatctttgcctgggtactggccatcattctgatg
ctggcgggagccctggcgattatgcaactgcctgttgcgcaatacccaactatcgcaccg
cctgcggtcgcgatttccgcgacctaccctggggccgatgcgcaaacggtgcaggatacc
gtgactcaggttatcgaacagaatatgaacggtattgataacctgatgtatatgtcatcc
accagcgactctgcgggtagtgtgaccatcacgttaacctttcagtccgggaccgatccg
gatatcgcccaggttcaggtgcagaacaagctgcaattggcgacgccgttgctgcctcag
gaagtacaacagcaagggattagcgtagaaaaatcgagcagcagcttcttgttagtcgca
ggctttgtttctgacaatccgcaaacgactcaggacgatatttccgactacgttgcctca
aacgtgaaagatacgatcagccgccagggcggtgtaggtgatgtccaactctttggcgcg
cagtacgcaatgcgtatctggctggatgccaatttgctgaacaaataccagctcacgccg
gttgaagtcatcaatcagttgaaagtgcagaacgaccagatcgcagccggtcagttgggc
ggaacgcctgcgctgccgggtcaacagttgaacgcctccatcattgcgcagacgcgcctg
aaagatcccgaggaattcggcaaagtcacattacgggtaaacagtgacggttccaccgtt
cgccttaaagatgttgcgcgtatcgaacttgggggggaaagctataacgttgtcgcccga
attaacggtaaaccggcagcgggcctgggaatcaagctggcgaccggagccaatgctctg
gataccgcaaaggcgatcaaagacaaactcgtcgagctacaacctttcttcccacaaggg
atgaaagtcgtttatccctacgacacgacaccgtttgtaaagatctccattcacgaagtg
gtgaaaacgctgttcgaagcgattgtcctggtcttcctcgtgatgtatctgtttttgcag
aacatccgcgcaacgctcattccgaccattgcggttcccgtcgtgctgctgggtacgttt
gcgatcctctcggcgtttggctactcgatcaacaccctgacgatgttcgggatggtactg
gcgatcggccttctggtcgatgacgccatcgtggtggtggaaaacgttgaacgcgtaatg
atggaggacaagttgtcgcccaaggaggcaacggaaaaatccatgtcccagatccagggg
gcgctggttggaatcgcgatggtgctgtccgctgtcttcatcccgatggctttcttcggt
ggctccaccggggctatttaccgccagttttctatcaccatcgtatccgcaatggcactc
tccgttctggtggcattgatcctgaccccagcactttgcgcaacgctgcttaaaccgttg
tcaactgagcaccacgagcagaaagggggattcttcggctggtttaatgccaaatttgac
ctcagcgtcaaccactacaccagcagcgtcagcggtattgtacgcaacaccggacgctac
ctgattatctacgtcctgattttcgtcgggatggcggtattgtttctacgtctgccgacc
tccttcctccctgaagaagatcagggggtattcatgacaatgatccagctgcctgccggg
gcaacccaggaacgaacccaaaaagtgctggatcaggttacgcattactacctgagtaac
gaaaaagcgaacgttgaaagtgtatttacggtcaatggcttcagctttagcggtcaggcg
cagaacgcaggcctggctttcatcagcctaaaaccctgggacgagcgtagtggcaaggaa
aacagcgtcgaagcggtgattgcgcgcgcgactcacgccttcagtcagatcccggatggg
ctggtctttcccttcaacatgccggcgattattgaactgggcaccgcgaccggcttcgac
tttgagctcattgaccaggggggactgggtcatgccggactaacctccgcgcgtaatcag
ctattgggcatggtggctaagcactctgatctgctggtccgtgttcgccctaacggtctg
gaggatactccacagttcaagctggatgttgaccaggaaaaagcgcaggcgcttggcgtt
gccttgtcagacattaacgaaacgatctctgcatcactcggtggctcctatgttaacgac
tttattgaccggggacgtgtgaagaaagtctatgttcaggcggatgcgaaattccgtatg
ttgccagaggacatcaacaatctgtacgttcgaagcgccaacggcaagatggtccccttc
tctgcctttagtaccgcccgctgggtgtatggttctccacgtctggaacgctacaacggc
atgccatcgatggagatactgggggaagcggcaccaggacgtagcaccggagaggcgatg
gcgttgatggaagatctcgcatcaaaactgccaaatggcatcggccatgactggacggga
atgtcatatcaggaacggctgtccggcaatcaggcaccggccctgtatgccatctcgctg
atcgtcgtgttcctctgtcttgccgcactgtatgaaagctggtccattccgttctcagta
atgctggttgtcccgctcggtgttgtaggcgcgcttctggccgcctccctgcgcgggctg
aataacgacgtctatttccaggtcgggctattaaccacgattggactttccgcgaaaaac
gccattctgatcgtggaatttgccaaggatctgatggaaaaggaaggtcgtggcctgatc
gaggcaacgcttgaggctgcacgtatgcgtctacgccctattctgatgacctcactcgcg
ttcatcctcggcgtaatgccgctggtcatcagtcggggagcgggaagcggcgcccagaat
gcggtcggaaccggtgtgatgggagggatgctgacggcaacgctgctggccatcttcttt
gttccggtcttctttgtcgtcgtcagaggccgatttaacaaatctcaggggtaa
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