Citrobacter farmeri: CI104_06580
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Entry
CI104_06580 CDS
T05012
Name
(GenBank) MexE family multidrug efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
cfar
Citrobacter farmeri
Pathway
cfar01501
beta-Lactam resistance
cfar01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
cfar00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
CI104_06580
01503 Cationic antimicrobial peptide (CAMP) resistance
CI104_06580
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cfar03036
]
CI104_06580
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cfar02000
]
CI104_06580
01504 Antimicrobial resistance genes [BR:
cfar01504
]
CI104_06580
Chromosome and associated proteins [BR:
cfar03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
CI104_06580
Transporters [BR:
cfar02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
CI104_06580
Antimicrobial resistance genes [BR:
cfar01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
CI104_06580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-barrel_RND
BSH_RND
HH_MFP_RND
RND-MFP_C
YknX_C
HH_CzcB
Beta-barrel_RND_2
BSH_CusB
BSH_YhbJ
HH_AAEA_pHBA
HH_EMRA
BSH_CzcB
HH_CyaD
TPR_1
Clathrin_H_link
Motif
Other DBs
NCBI-ProteinID:
AST78771
UniProt:
A0A8H9NTM9
LinkDB
All DBs
Position
complement(1337745..1338938)
Genome browser
AA seq
397 aa
AA seq
DB search
MNKNRGFTPLAVVLMLSGSLALTGCDDKQAQQGGQQMPEVGVVTLKTEPLQITTELPGRT
SAFRIAEVRPQVSGIILKRNFEEGSDIEAGVSLYQIDPATYQATYESAKGDLAKAQAAAS
IAQVTVNRYKKLLGTQYISQQDYDQALADAQQANAAVVAAKAAVETARINLAYTKVTSPI
SGRIGKSAVTEGALVQNGQATALATVQQLDPIYVDVTQSSNDFLRLKQELANGTLKQENG
KAKVELVTSDGIKFPQSGTLEFSDVTVDQTTGSITLRAIFPNPDHTLLPGMFVRARLEEG
TNPTALLVPQQGVTRTPRGDATALVVGADDKVETRQIVASQAIGDKWVVTDGLKSGDRVI
ISGLQKVRPGVQVKAQEVTSDNQQQAANGGKSEQTKS
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaaaacagagggtttacgcctctggcggtcgttctgatgctctcaggcagctta
gcgcttacaggatgtgacgacaaacaggcccaacaagggggccagcagatgccagaagtt
ggggttgtgacgctcaaaaccgaacctctacagatcacaactgaactcccgggtcgcacc
agtgctttccgtattgcggaagttcgtcctcaggtgagcggtattatcctgaagcgtaat
ttcgaggaaggtagtgatatcgaagcaggagtgtctctctatcagattgatcctgcgact
tatcaagccacttatgaaagcgcgaaaggcgatctggcgaaagcacaggccgcagccagc
atcgctcaggtaacggttaaccgttataaaaagctgctgggaacgcagtatatcagtcaa
caagattacgatcaggcgctggccgatgcgcaacaggcgaatgccgccgtcgttgccgcg
aaagccgcggtcgaaacagcacgcattaacctggcgtataccaaagtaacctctccgatt
agcggccgtattggtaaatccgccgtgacggaaggggccctggtgcagaacggtcaggca
accgcgctggcaaccgtgcagcagctcgatcctatctatgttgacgtgacgcagtcgagc
aacgacttcctgcgtctgaaacaagaactggctaacggaacgctgaaacaggaaaacggc
aaggcgaaagtcgagctggtgaccagtgacggtatcaagttcccgcagtccggtacgctt
gaattttcagacgtgaccgtcgatcagaccaccggttccattaccttacgcgccatcttc
cctaacccggatcacaccttactgccgggcatgtttgtccgcgcacgtctggaagaaggg
accaacccgactgcattgctggtgccgcaacaaggtgtgacccgtacgccgcgcggtgat
gcgacagcactggttgtgggggctgacgacaaagtggaaacccgtcaaatcgttgccagt
caggcaattggcgataaatgggtggtcactgacggacttaaatctggcgatcgcgtcatt
atctctggtttgcaaaaagttcgccctggcgtgcaggtaaaagcgcaggaagtaacatct
gacaatcaacaacaagccgcgaacggtggcaagtcagagcaaacaaagtcttaa
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