Coprobacter fastidiosus: Cfast33896_26370
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Entry
Cfast33896_26370 CDS
T09127
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
cfas
Coprobacter fastidiosus
Pathway
cfas01501
beta-Lactam resistance
cfas01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
cfas00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Cfast33896_26370
01503 Cationic antimicrobial peptide (CAMP) resistance
Cfast33896_26370
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cfas03036
]
Cfast33896_26370
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cfas02000
]
Cfast33896_26370
01504 Antimicrobial resistance genes [BR:
cfas01504
]
Cfast33896_26370
Chromosome and associated proteins [BR:
cfas03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
Cfast33896_26370
Transporters [BR:
cfas02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
Cfast33896_26370
Antimicrobial resistance genes [BR:
cfas01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
Cfast33896_26370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BSH_RND
Beta-barrel_RND
YknX_C
BSH_CzcB
HH_CzcB
HH_EMRA
HH_MFP_RND
Biotin_lipoyl
BSH_YknX
BSH_CusB
HH_YBHG
Beta-barrel_RND_2
RND-MFP_C
BSH_Fcp1
IN_DBD_C
HH_AAEA_pHBA
Motif
Other DBs
NCBI-ProteinID:
BEG63682
LinkDB
All DBs
Position
3410648..3411754
Genome browser
AA seq
368 aa
AA seq
DB search
MKYLIIPILSGLILLYSCGSQPQEQTSAKYKTLNVGFSNQTLKRDYTATLRGRQYVEIRP
QVSGIITKICMNEGDVVHRGQVLFVIDQVPYKAALETAMANVKSAESKLATAKLTAESKE
ELFRENVVSEFDLQTARNALAEAQAALALARAEEINARNNLSYTEVKSPVDGVASMIPYR
VGALVDSNISEPLVTVSDDNEVFAYFSMDENQILDLVQQYGSLQKTMEQMPEVELMLSNG
KVYQYSGKIDAISGTVDSGTGAVSLRASFKNPDKLLRNGGSGKVIVPTHRDSVIVIPQTA
TYELQNRIFVYKVVDGKAKSAPIEVFRLNNGTEYIVEAGLVPGDVIIAEGAGLVREGTVI
DSHTSTNE
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgaaatacctcattattcctattttatcggggcttatactgctctattcgtgcggatct
cagcctcaggaacaaacatctgctaagtataaaactttgaatgttggattcagtaatcaa
acgcttaagagagattataccgctacgcttcgagggcggcaatatgtggagatacgtccg
caggtaagcggtataatcacgaaaatttgtatgaatgaaggggatgtcgtacatagggga
caagttctttttgttatcgatcaagttccgtataaagctgcgcttgagacggctatggct
aatgtgaagagtgccgaatctaaacttgcgacagcaaaacttactgctgaaagtaaagag
gaactgtttcgggagaatgtggtttctgaattcgatttgcaaactgcccgtaatgctctt
gccgaagctcaagctgcacttgctttggctcgtgccgaggagataaatgcacgtaataat
ctttcttatacagaagtaaaaagtccggtagatggagtcgccagtatgattccttatcgt
gtaggagctcttgtcgatagtaatatttcagaaccgttagtcacggtttctgatgataac
gaagtctttgcttatttctcgatggacgagaatcaaattctggatcttgtacaacaatat
ggttcgttgcagaaaacaatggagcaaatgcctgaagtagaattgatgctcagtaatggt
aaagtttatcaatattccggtaaaattgatgctattagcggaaccgttgatagcgggacg
ggtgcagtaagtcttcgtgcttcatttaaaaatccggataagttgttacgcaatggtggt
agcggaaaagtgatcgttcctactcatcgagacagtgtaattgttattcctcaaactgcg
acttatgaattgcaaaatcgcatttttgtctataaagtagttgacggtaaggcgaagtct
gcaccgattgaagtgttccgactgaataacggtacggaatatattgtcgaggcgggactc
gtccccggtgatgttattattgccgaaggtgcaggtcttgtgcgtgaaggaacagtaatc
gattctcatacttccactaatgaataa
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