Ctenocephalides felis (cat flea): 113373620
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Entry
113373620 CDS
T08578
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
cfel
Ctenocephalides felis (cat flea)
Pathway
cfel03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cfel00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113373620
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cfel03041
]
113373620
Spliceosome [BR:
cfel03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
113373620
Complex C
U5 SnRNP specific factors
113373620
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
MMR_HSR1
Roc
Motif
Other DBs
NCBI-GeneID:
113373620
NCBI-ProteinID:
XP_026469694
LinkDB
All DBs
Position
Unknown
AA seq
973 aa
AA seq
DB search
MDIDLYDEFGNYIGPELESDAEEDDEQSIYGQVEPEDDDAIADEDEHVGEQEGTMSVVLH
EDKRYYPSAVEVFGPDVETIVQEEDAQPLDVPLMEPVKKKKFHLKEQELPETVYNMEFLA
DMMDNPMLIRNVALVGHLHHGKTSFVDCLVRQTHPTSFDVAEEKDVRYTDTLFIEQERGV
SIKSTPITLVLPDIKHKSYLMNIFDTPGHVNFSDEVTAAMRLCDGVVLFVDAAEGVLLNT
ERILKHALHERLDIVVCINKIDRLMLELKLPPLDAYYKLRHIIEEINGLMTLHSKDDAQL
ISPALGNVCFASSQYGMCFTLKSFASIYEQFYPGINADEFARRLWGDIYFNSKSRKFTKK
PPHQTAQRSFIEFILEPLYKVFAQVVGDVDLQLADSLAELGISLTKEEMKLNVRPLLRIV
CNRFMGDFSGFVDMCVRQIRSPVDNAKNKIDHLYLGPNDSRIYEDMLKCNQDGKLMVHSS
KMYPTDDCTFFQVLARVMSGTLYANQEVRILGENYTLMDEEDSRVLTVGRLWIYEARYKV
EVNRIPAGNWVLIEGIDQPIVKTATITDLDTTEDVYIFRPLKFNTQSVIKIAVEPVNPSE
LPKMLDGLRKVNKSYPLLTTKVEESGEHVVLGTGELYLDCVMHDLRKMYSEIDIKVADPV
VSFCETVVETSSLKCFAETPNKRNKITMIAEPLEKGLAEDIESESVRIDWNKKKLGDFFQ
TKYDWDLLAARSIWAFGPETTGPNILVDDTLPSEVDKGLLESVKDSIVQGFQWGAREGPL
CEEPIRNVKFKILDAVIADEPLHRGGGQVIPTARRVAYSAFLMATPRLMEPYLFVEVLAP
ADCVSAVYTVLAKRRGHVTQDAPVPGSPLYTIKAFIPAIDSFGFETDLRTHTQGQAFCLS
VFHHWQIVPGDPLDKSIIIRPLEPQPATHLAREFMVKTRRRKGLSEDVSINKFFDDPMLL
ELARQDVLLNYPL
NT seq
2922 nt
NT seq
+upstream
nt +downstream
nt
atggatatagacctgtatgatgagtttggtaattatattggaccagaactggaaagtgat
gctgaagaagacgatgagcaaagcatatatggtcaagtcgaaccagaggatgacgatgct
attgcagatgaagatgaacatgtcggagaacaagaaggtacaatgtctgttgtcttgcat
gaagataaaaggtattacccttcagctgtcgaagtatttggacctgacgtagaaaccata
gtacaagaagaagatgcccagccattagatgttcctttaatggaaccagtgaaaaaaaag
aagtttcatttaaaagaacaagaattgccagagactgtttataacatggaatttttagcc
gatatgatggacaatccaatgctcattcgtaacgttgctttagtaggccatttgcaccat
ggaaagacttcttttgttgattgtttagtacgacaaacacatcccacatcctttgatgta
gcagaagagaaagatgtgagatatactgatacattatttatcgaacaagaaaggggtgtc
agtatcaaatccacacctatcacattggttctgccagatattaaacacaaaagctatttg
atgaatatatttgatacaccaggtcatgtaaacttctctgatgaagtgacagcagccatg
cgtttatgtgatggtgttgtgttatttgttgatgcagccgaaggtgtacttttaaatact
gaacgaattttgaagcatgctttgcatgagagacttgatatagttgtttgcattaataaa
atcgatagattaatgctagaattgaaattaccaccacttgatgcttattataagctgaga
catattattgaagaaattaatggtcttatgacattacattctaaagatgatgcacaattg
atatcaccagctttgggtaatgtttgttttgcaagttcccagtatggaatgtgtttcaca
ttgaaatcatttgccagcatttatgagcagttttatccaggaattaatgcagatgaattt
gccagaaggttatggggtgatatctactttaatagtaaaagtcgcaaattcaccaaaaag
ccaccacatcagacagctcaaagaagtttcattgagttcattctggaaccattgtacaaa
gtttttgctcaagttgttggcgatgtagatcttcagttggcggattctttagcagaactt
ggtataagcctaaccaaagaggaaatgaagttaaatgtgaggcctttgttgagaatcgtt
tgcaacagatttatgggagactttagtggatttgtggatatgtgtgtgaggcaaatacgt
tcgccagtagataatgccaaaaacaaaattgatcacttgtatcttgggcctaatgatagc
aggatttatgaagatatgttgaaatgcaaccaagatggaaaactaatggttcattctagc
aaaatgtaccctactgatgattgcacattcttccaagttttagctagagttatgagtggc
acattatatgcaaatcaggaagttcgaattttgggagaaaattatacattgatggacgaa
gaagattctagagttctaactgttggcagattatggatatatgaagccagatataaggtt
gaagtaaatcgcattcctgctggtaactgggttctcatagaaggtatcgatcaaccaatt
gtaaaaacagctactataactgatttggataccacagaagatgtgtacatatttagacca
ttgaaattcaatacacagtctgttattaaaatagctgtagagccagttaatccttcagaa
ttgccaaaaatgttagatggattaagaaaggttaataagtcatatccacttctaacaaca
aaagttgaagaatctggagagcacgttgttctaggtactggagaattatatctagattgc
gttatgcacgatttgagaaaaatgtactcagaaattgatatcaaagtggctgatcctgtt
gtgtcattctgtgaaactgttgttgaaacaagttccttaaaatgttttgctgaaactcca
aataaaagaaataaaattactatgattgccgaacctctagaaaaaggtttggctgaagat
attgaaagtgaaagtgttaggatcgattggaacaaaaagaaattaggagacttcttccaa
acgaaatatgactgggatttgctagctgctagatctatatgggcttttggaccggaaact
acaggtccaaatattcttgttgacgacacattgccatctgaggttgacaaaggacttttg
gagtctgttaaagattctattgtgcaaggtttccaatggggtgcgagggaaggacctctt
tgtgaagaacctattagaaatgttaaatttaaaattttggatgctgttattgctgacgag
ccattgcatagaggaggaggtcaagtcattcccacagcgcgtcgagtagcatattcagct
tttttgatggccactcctcgtctaatggagccttacttatttgtagaagttttggctcct
gctgattgtgtgtctgctgtttatacagtacttgcaaaacgaagagggcacgtgactcaa
gatgctccagttcctggttctcctctgtatacgatcaaagcgtttataccagccatagat
tcatttggtttcgaaactgacctgagaacgcatacacaagggcaggctttctgtttatca
gtatttcatcattggcagattgttcccggtgatccattggacaagagcataataattcgt
cctttggaacctcagccagctacacatttagcaagagaattcatggttaaaacaagaagg
aggaaagggctttctgaagacgtatctataaacaaatttttcgatgatcctatgttgtta
gaattagctaggcaagatgtactattaaattatcctttgtaa
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