Ctenocephalides felis (cat flea): 113375208
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Entry
113375208 CDS
T08578
Name
(RefSeq) DNA ligase 4-like
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
cfel
Ctenocephalides felis (cat flea)
Pathway
cfel03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
cfel00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
113375208
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cfel03400
]
113375208
Enzymes [BR:
cfel01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
113375208
DNA repair and recombination proteins [BR:
cfel03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
113375208
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DNA_ligase_A_C
RNA_ligase
BRCT
BRCT_2
mRNA_cap_enzyme
Motif
Other DBs
NCBI-GeneID:
113375208
NCBI-ProteinID:
XP_026470938
LinkDB
All DBs
Position
Unknown
AA seq
741 aa
AA seq
DB search
MGTQEIGLSVASKIPFSDFCNRCELFQNAPKTKKFDFMRNYINYFRNFAEEFKSEHANAD
VSFYPVLRLLVPQAERERGAYGLKESTLAKILIRVLSISKEAADAKKLLNYKSASSYGDF
AEVAHIVLKLRCAQKGTLTVEDVNKHLDNIAMKYAEHVQREVDDELISMMRSMTALEVKW
LIRIILKDMKFNIAQNSILKLYHIDAPELFDVSNSLLKVCTTLNNPADRLHKLEIELFCP
FRPMLSKRLDIAEIQKHIKSGVKYYLETKFDGERFQIHMLNGRYKYFSRNGFCFTQEYGA
SAKEGMLTPKIDSLLKPNVKSFILDGEMMGWNKHKKCFGSKGMNFDVKKLVSDSVHQPCF
CVFDITYFNNEVLTDKPLSDRLKILDEIFEESEGVLIQSKKTEATFAEQVIEALNTAIDK
NEEGIVMKISNSIYKPNSRNAGWFKIKPEYTAGILSELDLLIIGGYYGEGKTKGRISSFL
LGVAVVDEPEESTPCMFYSVGRVGIGFTADELNELTRSLRPYWKTTPPTGNRPNRRIREC
PPNLAWTKEAPDVWIEPKNSRILQVKATELIRTTAFKTNYTLRFPRVEKIRYDKPWHSNY
SNVEKLTTRHININDIEQDVNTSSKSPRKQTRIEPAPISLQLDSKKVLIISNNNDFIGKE
FCVLTGTPELTKPEIEKKIIENGGAVVQNAGPKTNCVLVGKISMRVTSHINLLKVNETED
ATDVVHVSWLLRCFQNGPFAL
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atgggtactcaagaaattggccttagtgttgcatctaaaataccattcagtgacttctgt
aatcgttgtgaattatttcaaaatgcacccaagactaaaaagttcgattttatgcgaaat
tacataaattattttagaaattttgcggaagagttcaagtcagaacatgcaaacgcggac
gtaagtttttatcctgtattacgattattagttcctcaagcagaaagagaaagaggtgcc
tatgggctaaaagaatctactttagcgaagattttaattagggttttatcaatatccaaa
gaagctgcggatgccaaaaaattgctcaattataaaagtgcgtcgtcatatggggatttt
gccgaagtcgcccacattgtgttgaaattacggtgtgctcaaaagggaactctaactgtg
gaagatgtcaacaaacatttggacaatattgccatgaaatatgctgagcatgtacaacgg
gaagtagatgatgaattaatttcaatgatgcgatcaatgactgctttagaagtaaaatgg
cttatccgaatcatattgaaggatatgaaatttaacatagcacagaattcgatcctaaaa
ttgtaccatatagatgcccctgagttattcgacgttagtaatagcttactcaaggtttgt
acaacgcttaacaatcccgctgatcgcctgcataaattggaaatagaattgttttgcccg
tttcggccaatgctatcaaaaagattggacatagctgaaatacaaaaacatattaaatca
ggcgtaaaatactatttggaaactaaattcgacggagagagatttcaaattcatatgttg
aatggccgatataaatatttttctagaaatggtttttgttttacgcaagagtatggtgct
tcagctaaggaaggcatgctaacccctaaaatagattctcttttaaaacctaatgttaaa
agttttatattggatggagaaatgatgggctggaataaacacaaaaaatgctttggatct
aaaggtatgaatttcgacgttaagaagctagtgagtgattctgttcatcagccgtgtttt
tgcgtgttcgacatcacatatttcaataatgaagtattaacggataaaccactatcggac
agattaaaaattctggacgaaatatttgaagaatcggaaggggttttaatacagagcaag
aaaacggaagcaacatttgcagaacaggtaatcgaagctctcaataccgcgattgacaaa
aacgaagagggtatagttatgaaaatttcaaattcgatctacaaacctaatagtagaaat
gctggctggtttaaaataaaaccagagtatacagccggcattctatcagaactagattta
ttaattattggaggatattatggtgaaggaaaaacgaagggtagaataagcagttttttg
cttggagttgctgtagtggatgaacctgaagagtctacaccatgcatgttttactcagtc
ggccgtgttggcataggatttacagcagatgaattaaatgaattaactcgatctttacgt
ccctattggaagacgacgcctccaaccggtaatagaccaaatcgtcgaatacgcgaatgt
ccaccaaacttagcttggactaaagaggcacccgatgtatggattgaacctaaaaattcg
cgcattttgcaggtaaaagcaaccgagttgattcgtactactgcattcaaaaccaattat
actcttagattccctagagttgagaaaattcgttatgataaaccctggcatagtaattac
agcaacgttgagaaattaacaacaagacacataaatataaatgatatcgaacaagatgtt
aataccagttcaaagagtcctagaaaacaaaccagaatagaaccggcaccaatttcacta
caattagattctaaaaaggtattgatcatttcaaacaataatgatttcataggaaaagaa
ttctgtgtactaacaggaacgccagaattaacgaagcctgagatagagaagaaaattatt
gagaatggtggtgcagttgtacaaaatgcaggtccaaaaactaattgtgtattagtggga
aaaatttcaatgcgtgtcactagccacataaatttacttaaagttaatgaaactgaagat
gcgactgatgtagtacatgtgtcttggttattgagatgttttcaaaatggtccttttgcc
ttatag
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