Ctenocephalides felis (cat flea): 113387992
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Entry
113387992 CDS
T08578
Name
(RefSeq) TAR DNA-binding protein 43-like
KO
K23600
TAR DNA-binding protein 43
Organism
cfel
Ctenocephalides felis (cat flea)
Pathway
cfel03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cfel00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
113387992
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cfel03019
]
113387992
Messenger RNA biogenesis [BR:
cfel03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
113387992
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
TDP-43_N
RRM_1
RRM_PARP14_3
RRM_7
TDP-43_C
RBD_AKAP-17A
Motif
Other DBs
NCBI-GeneID:
113387992
NCBI-ProteinID:
XP_026481179
LinkDB
All DBs
Position
Unknown
AA seq
475 aa
AA seq
DB search
MSTEYVQVAEEECEEPIELPLEDDGTLLLSTLTGQFPGASGLKYRNPGSKSMRGVRLADG
RMHPPTLQGWKDEIFFCVFPKENKRKSDDTLENSTAKTKRMETRLRCTDLIVLGLPWKTT
EQDLREYFETFGEVLMAQVKKDTKTGQSKGFGFVRVGSYEAQMKVLSQRHMIDGRWCDVR
VPNSKEGMVQQMPCKVFVGRCTEDLSAEDLREYFSKFGEVTDVFIPRPFRAFSFVTFLDP
EVAQSLCGEDHIVKGVSVHVSNAAPKSDQNRNQNNSRSNMNMNQYSGGPNNRGGYMSNGM
GQPANVWANNGGGSHQGRGNIDMPNLQTLGINPQGQNNGGGGGGQNLGNMGMAALSALPM
NPALVAAALNQAGWGLIGNLQQQQGTTGGPQQGGTTATGADQGFAGPSGAGPVSTHGTQG
HHPHQHQGQQQTPGGNFLNWMSQQSGGNQQRTNQSWPPQIAAQGPDPNKSSFKYE
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacagaatatgtgcaagttgctgaagaagaatgcgaggaaccaatagaattacct
ttggaggacgatggtactctactgttatctactttaacaggacagtttcctggagcctca
ggtttgaagtatcgcaatcctggttctaaatctatgcgtggagtcaggctcgctgatgga
aggatgcatccaccaacattacaaggatggaaagatgagatatttttctgtgtttttcca
aaagaaaacaagcgtaaatctgatgacactttagaaaattctacagcaaaaacaaaacgt
atggaaacaagattacgttgcactgacttaattgttttgggtctcccatggaaaactact
gaacaagatttaagagagtattttgaaacttttggagaagtattgatggctcaagttaag
aaagatactaagacgggacaatcaaaaggatttggattcgtaagagttggttcttatgaa
gctcaaatgaaagttttatcacagagacacatgattgatggcagatggtgtgatgtgagg
gttcctaattccaaggagggtatggttcaacaaatgccttgtaaagtatttgtgggaagg
tgcacagaagatttaagcgcagaagatcttcgtgaatatttctcgaagtttggtgaagta
actgatgtatttattcctcgtccgttcagggcattcagttttgttacattcctggaccca
gaagttgctcaaagtttgtgtggggaggaccatattgttaagggtgtttctgtgcatgtg
tcgaatgcggctccaaaatccgaccaaaatagaaatcaaaataattccagaagtaatatg
aacatgaaccagtatagtggaggacctaataaccgaggaggctacatgagtaatggaatg
ggacaaccggccaatgtttgggctaataacggaggaggatctcatcaaggacgtggcaat
atagatatgccgaatttgcagactcttggaataaatccacaaggacaaaacaatggtgga
ggtggcggtggacaaaatcttggaaatatgggtatggcagccctgagtgcgctccctatg
aatcccgctctggtcgcagccgctctcaaccaagccggatggggccttattggcaacctt
cagcagcagcagggtacgacaggtggacctcagcaggggggaactacggctacaggagcg
gatcagggcttcgcgggcccgagcggcgcgggaccagtgagtacacatggaacgcagggc
caccatccgcatcaacaccagggtcaacagcaaactccgggtggcaattttctgaattgg
atgtcccaacagtcgggtggtaaccaacagagaactaatcaatcttggccaccacaaatt
gcagcacagggacctgacccaaataaatcctctttcaagtatgagtaa
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