KEGG   Ctenocephalides felis (cat flea): 113387992
Entry
113387992         CDS       T08578                                 
Name
(RefSeq) TAR DNA-binding protein 43-like
  KO
K23600  TAR DNA-binding protein 43
Organism
cfel  Ctenocephalides felis (cat flea)
Pathway
cfel03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:cfel00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    113387992
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cfel03019]
    113387992
Messenger RNA biogenesis [BR:cfel03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Negative regulators of mRNA 3' end processing
     113387992
SSDB
Motif
Pfam: TDP-43_N RRM_1 RRM_PARP14_3 RRM_7 TDP-43_C RBD_AKAP-17A
Other DBs
NCBI-GeneID: 113387992
NCBI-ProteinID: XP_026481179
LinkDB
Position
Unknown
AA seq 475 aa
MSTEYVQVAEEECEEPIELPLEDDGTLLLSTLTGQFPGASGLKYRNPGSKSMRGVRLADG
RMHPPTLQGWKDEIFFCVFPKENKRKSDDTLENSTAKTKRMETRLRCTDLIVLGLPWKTT
EQDLREYFETFGEVLMAQVKKDTKTGQSKGFGFVRVGSYEAQMKVLSQRHMIDGRWCDVR
VPNSKEGMVQQMPCKVFVGRCTEDLSAEDLREYFSKFGEVTDVFIPRPFRAFSFVTFLDP
EVAQSLCGEDHIVKGVSVHVSNAAPKSDQNRNQNNSRSNMNMNQYSGGPNNRGGYMSNGM
GQPANVWANNGGGSHQGRGNIDMPNLQTLGINPQGQNNGGGGGGQNLGNMGMAALSALPM
NPALVAAALNQAGWGLIGNLQQQQGTTGGPQQGGTTATGADQGFAGPSGAGPVSTHGTQG
HHPHQHQGQQQTPGGNFLNWMSQQSGGNQQRTNQSWPPQIAAQGPDPNKSSFKYE
NT seq 1428 nt   +upstreamnt  +downstreamnt
atgtcaacagaatatgtgcaagttgctgaagaagaatgcgaggaaccaatagaattacct
ttggaggacgatggtactctactgttatctactttaacaggacagtttcctggagcctca
ggtttgaagtatcgcaatcctggttctaaatctatgcgtggagtcaggctcgctgatgga
aggatgcatccaccaacattacaaggatggaaagatgagatatttttctgtgtttttcca
aaagaaaacaagcgtaaatctgatgacactttagaaaattctacagcaaaaacaaaacgt
atggaaacaagattacgttgcactgacttaattgttttgggtctcccatggaaaactact
gaacaagatttaagagagtattttgaaacttttggagaagtattgatggctcaagttaag
aaagatactaagacgggacaatcaaaaggatttggattcgtaagagttggttcttatgaa
gctcaaatgaaagttttatcacagagacacatgattgatggcagatggtgtgatgtgagg
gttcctaattccaaggagggtatggttcaacaaatgccttgtaaagtatttgtgggaagg
tgcacagaagatttaagcgcagaagatcttcgtgaatatttctcgaagtttggtgaagta
actgatgtatttattcctcgtccgttcagggcattcagttttgttacattcctggaccca
gaagttgctcaaagtttgtgtggggaggaccatattgttaagggtgtttctgtgcatgtg
tcgaatgcggctccaaaatccgaccaaaatagaaatcaaaataattccagaagtaatatg
aacatgaaccagtatagtggaggacctaataaccgaggaggctacatgagtaatggaatg
ggacaaccggccaatgtttgggctaataacggaggaggatctcatcaaggacgtggcaat
atagatatgccgaatttgcagactcttggaataaatccacaaggacaaaacaatggtgga
ggtggcggtggacaaaatcttggaaatatgggtatggcagccctgagtgcgctccctatg
aatcccgctctggtcgcagccgctctcaaccaagccggatggggccttattggcaacctt
cagcagcagcagggtacgacaggtggacctcagcaggggggaactacggctacaggagcg
gatcagggcttcgcgggcccgagcggcgcgggaccagtgagtacacatggaacgcagggc
caccatccgcatcaacaccagggtcaacagcaaactccgggtggcaattttctgaattgg
atgtcccaacagtcgggtggtaaccaacagagaactaatcaatcttggccaccacaaatt
gcagcacagggacctgacccaaataaatcctctttcaagtatgagtaa

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