Caproicibacter fermentans: HCR03_19270
Help
Entry
HCR03_19270 CDS
T07651
Symbol
vanR
Name
(GenBank) VanR-ABDEGLN family response regulator transcription factor
KO
K18349
two-component system, OmpR family, response regulator VanR
Organism
cfem
Caproicibacter fermentans
Pathway
cfem01502
Vancomycin resistance
cfem02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
cfem00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
HCR03_19270 (vanR)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
HCR03_19270 (vanR)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
cfem02022
]
HCR03_19270 (vanR)
01504 Antimicrobial resistance genes [BR:
cfem01504
]
HCR03_19270 (vanR)
Two-component system [BR:
cfem02022
]
OmpR family
VanS-VanR (VanE type vancomycin resistance)
HCR03_19270 (vanR)
Antimicrobial resistance genes [BR:
cfem01504
]
Gene sets
Vancomycin resistance modules
Vancomycin resistance, D-Ala-D-Ser type [MD:
M00652
]
HCR03_19270 (vanR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
Trans_reg_C
PDE8A_N
Motif
Other DBs
NCBI-ProteinID:
QNK40719
UniProt:
A0A7G8TAS8
LinkDB
All DBs
Position
complement(3896006..3896704)
Genome browser
AA seq
232 aa
AA seq
DB search
MGTDILVVDDEQAIADLVEVYLKSEGFTVHKFYNGEDAIRSVESEQIDLAILDVMLPDID
GFALCRKIREKHNFPVIMLTAKEEEMDKITGLTLGADDYVTKPFQPLELVARVKAQLRRF
IRYNSSEPEQPESILSFSGLMLNQDTHECTLNEKPLSLTPTEFSILWVLSFNRGHVVSSE
ELFRDVWGEKYYSNNNNTVMVHIRHLREKMNDSAEHPKYIKTVWGVGYKIEK
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
atgggcactgatattttagtggtagacgatgagcaggccatagcggatttggtggaagta
tacttaaaaagcgaaggatttaccgtgcataaattctataacggcgaggatgccattcgg
agcgtagaatcggaacagatcgatcttgcaatccttgacgtaatgttgccggatattgac
gggtttgccctctgccgaaaaatccgggaaaaacacaatttccccgttattatgctgacg
gcaaaagaggaggaaatggataaaattacgggtctgacgctcggtgcggacgattatgtg
acaaaaccgtttcagccgctggaactcgtcgctcgtgtcaaagcgcagctacgccggttc
atccgatataattccagtgaaccagagcagccagaatctattctttctttttccggattg
atgttgaatcaagatacacatgaatgtaccctcaatgaaaagccgctgtcgctgacgccg
acggaattttcaattttatgggttcttagcttcaatcgcggacatgtggtaagctcggaa
gaattgttccgggatgtttggggcgaaaagtactacagcaataacaacaacacggtcatg
gtccatatccggcatctgcgcgagaaaatgaatgattcggcagaacatcccaaatacatc
aaaacagtatggggggtcggctataaaattgaaaagtaa
DBGET
integrated database retrieval system
