Clostridium fermenticellae: D4Z93_11250
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Entry
D4Z93_11250 CDS
T06956
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
cfer
Clostridium fermenticellae
Pathway
cfer01501
beta-Lactam resistance
cfer01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
cfer00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
D4Z93_11250
01503 Cationic antimicrobial peptide (CAMP) resistance
D4Z93_11250
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cfer02000
]
D4Z93_11250
01504 Antimicrobial resistance genes [BR:
cfer01504
]
D4Z93_11250
Transporters [BR:
cfer02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
D4Z93_11250
Antimicrobial resistance genes [BR:
cfer01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
D4Z93_11250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
PIG-P
Motif
Other DBs
NCBI-ProteinID:
AYD41069
UniProt:
A0A386H5T2
LinkDB
All DBs
Position
complement(2422228..2425293)
Genome browser
AA seq
1021 aa
AA seq
DB search
MFLADVSLKRPVFITVIIIALLALGIVSYKSLSVDQFPDVDTPVVSVTVVEAGAAPDQIE
SKVTKKIEDSIGQISGVSHISSTVTEGVSSTAIIFELNKPSAEALQDVKDKVSNIRGTLP
TDITEPVIAKFDATAQPIVSLTVSGEMSSKDISEVADDDVVKKLQTINGVGAVNTYGEEQ
REIHINLDKEKMNSYNITIAEVSNSLKSDNIDVSSGKIDDGDTEISLKTNAAIKNVDDFL
NILVTTRDNSEIRLKDIATVKDSSKEKDSLSFYNGKPAIGIDVLKQSNSNTVEVADSIKE
QIANIQKGLPSGVTIKVVRDNSTSIRDSVNDVQKTLIEGCILAVVVVFMFLKNAASTAIS
GIAIPISIITTFAVMKVMNFSLNIVSLMALSIAVGLLIDDAIVVIENIVRHLNMGKSPVK
AAKEATSEIGLAVMSTTFALVAVFLPIAMINGLVGKFLVQFGLTVAASVLVSLFVAFTLV
PMLSSKYLSSKEKPIPVVGKFLDKFGEFFDKLADSYANALRTVLKHKIWVIIIPIMMLVG
SLFIATKLNMGFIATSDKGELDIEADLDSSSTLNNASDITNEMENIIKKDHNVKYIYSTV
KSSKVSMLVKLSDKQDRKESADEIGDKMRQNLNNIPGIDLSVVNSGGFLPGKMAQYHIKG
DDFTKLQAYALKAKRVMENTPGAVDVGLTYKAGKPEVDFDVDRDKAADLGVSPATIASTL
GTLFNGTVVSQYETDKDRYDVRVQVQDSDKKNLDSLDGIYVPGKNNTMIPISQVTKKVFT
TSSSTINRYDKQREIQLTANYAGVSQSKFNNAFNKKLKTEAALPDGIEVTSGGADEQMNE
GMSGLVTALGMGVLFVFLVIAAQFESFLDPLAILLSLPLAIIGAILGLFIGNKELDMMSM
IGVIMLMGLVTKNAILLIDFARQNMSRGMSIEESLVEAGRTRLRPIIMTTLAMIFGMLPT
ALATGSGSELRAPMAFAIIGGLITSTLLTLLFVPAVYVYLNSFKNRFKMKNKKHSSQSVQ
L
NT seq
3066 nt
NT seq
+upstream
nt +downstream
nt
atgtttttagcagatgttagtttaaaaagaccagtatttataacagtaataattattgct
ttgttggctttgggtatagttagttataaaagtctgtctgtggaccagtttccagatgtt
gatactccagttgtatctgttacagtagttgaagctggggcggctccggatcagattgag
tctaaagtaacaaaaaagatagaagattctataggacaaatatctggtgtttcacatatt
agttcaactgtaacagagggagtttcaagtacagcaattatatttgaattaaataaacct
tcagctgaagcacttcaagatgtaaaagataaagtatccaatattagaggaactcttcca
acagatatcacagaacctgtaattgcaaagtttgatgctactgcacagcctatagtatcc
cttacggttagtggagaaatgtcaagtaaagatatatcggaggtagcagatgatgatgtt
gttaagaagctgcagacaataaacggtgttggagctgtcaatacatatggagaagaacaa
agagaaattcatataaatcttgataaagaaaaaatgaactcatataatattacaattgca
gaagttagtaatagtttaaaaagtgataatatagatgtatctagtggcaagattgatgat
ggtgatacagaaataagtttaaaaactaatgcagctataaagaatgtagatgatttccta
aatatattagtcactacacgtgataatagtgaaattagacttaaggatattgcaacagtt
aaggacagtagtaaagaaaaggatagtttatctttttataatgggaaaccggcaattggt
atagatgttttaaaacagtcaaattcaaatactgttgaagtagctgactctataaaagaa
caaattgctaatatccaaaaaggacttccatctggtgtaacaattaaagttgtacgtgac
aattcaacatctatacgtgattcagttaatgatgttcagaaaacactcatagaaggatgt
atacttgcagtagtagttgtttttatgttcttaaagaatgcggcaagtactgcaatctct
ggaattgcaataccaatatctataattactacatttgcagttatgaaggttatgaacttt
tcgctgaatatagtatctttaatggcattgtctattgcggttggattgcttatcgatgat
gcaatagttgttattgaaaatattgtaaggcatcttaatatggggaaaagtccggttaag
gcagctaaggaagcaacttctgaaataggacttgcagttatgtctactacttttgcgctc
gtagcagtttttctccctatagcaatgattaatggattggtaggaaagtttcttgtgcaa
tttggattgacggtagctgccagtgttttagtttcgttatttgtggcatttacactggtt
ccaatgctgtcatccaagtatttaagcagcaaagaaaagccaatacctgtagtaggaaag
tttttagataagtttggtgagttttttgataagctggcagattcttatgctaatgcttta
agaactgttttgaaacataagatctgggtaataataatacctattatgatgctggtagga
agtttgtttattgctacaaaattaaatatgggatttattgcgacttctgataagggagag
ttagatatagaagcagatttggattccagttctacactaaataatgcttctgatatcact
aatgaaatggaaaatataataaaaaaagatcacaatgtaaaatatatatattcaacagta
aaatcaagtaaagtaagcatgctcgtaaagctctcagataaacaggatagaaaagaaagc
gctgatgaaataggggataaaatgaggcaaaacttgaacaatattccgggaatagatttg
tctgttgttaatagtggaggttttcttccaggaaagatggcacagtatcatattaaaggt
gatgactttacaaaacttcaagcatatgctttaaaggctaaaagggtaatggaaaatact
ccgggtgctgtagatgtaggtttgacctataaggcaggtaaacctgaggtggattttgat
gtagatcgtgataaagctgcagacctaggagtaagtcctgctacaattgcaagtacacta
ggaacactttttaacggtactgttgtaagccaatacgaaacagataaggatagatatgat
gttcgtgtacaggttcaggattccgataagaaaaatcttgatagtttagatggaatttat
gtaccgggaaagaataatactatgattccaataagtcaggtaactaaaaaggtgtttaca
acatcttcttcaactataaatagatatgataagcagagagaaatacaacttacagcaaat
tatgccggagtgtcacagagcaagtttaataatgcatttaataaaaaactaaaaactgaa
gctgcattaccggatggaatagaagtgacgtctggtggagctgatgagcaaatgaatgaa
ggaatgtcaggactagtaacagcacttggtatgggagttctatttgttttcttagtaatt
gcagcccaatttgaaagctttttagatccccttgccattcttctttcactgcctcttgcc
attattggtgcaattttaggattgtttattggcaataaagaacttgatatgatgtcaatg
ataggtgttatcatgttaatgggtttagttacaaaaaatgcaattctgcttatagacttt
gcaaggcagaatatgagtcgtggtatgagtatcgaagaatccttagttgaggcgggccgt
acacgtttgagacctattattatgactactttggctatgatttttggtatgcttcctaca
gctttagctactggttcaggttcagagcttcgtgcccctatggcctttgcaattattgga
ggattgattacatcaacattattgacattattatttgttccagctgtttacgtatatttg
aatagttttaagaatagattcaaaatgaagaataaaaaacattcttctcaaagtgtgcaa
ctttaa
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